To further elucidate the migration history of the brown bears (Ursus arctos) on Hokkaido Island, Japan, we analyzed the complete mitochondrial DNA (mtDNA) sequences of 35 brown bears from Hokkaido, the southern Kuril Islands (Etorofu and Kunashiri), Sakhalin Island, and the Eurasian Continent (continental Russia, Bulgaria, and Tibet), and those of four polar bears. Based on these sequences, we reconstructed the maternal phylogeny of the brown bear and estimated divergence times to investigate the timing of brown bear migrations, especially in northeastern Eurasia. Our gene tree showed the mtDNA haplotypes of all 73 brown and polar bears to be divided into eight divergent lineages. The brown bear on Hokkaido was divided into three lineages (central, eastern, and southern). The Sakhalin brown bear grouped with eastern European and western Alaskan brown bears. Etorofu and Kunashiri brown bears were closely related to eastern Hokkaido brown bears and could have diverged from the eastern Hokkaido lineage after formation of the channel between Hokkaido and the southern Kuril Islands. Tibetan brown bears diverged early in the eastern lineage. Southern Hokkaido brown bears were closely related to North American brown bears.

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Because of their role in immune defense against pathogens, major histocompatibility complex (MHC) genes are useful in evolutionary studies on how wild vertebrates adapt to their environments. We investigated the molecular evolution of MHC class I (MHCI) genes in four closely related species of Eurasian badgers, genus Meles. All four species of badgers showed similarly high variation in MHCI sequences compared to other Carnivora. We identified 7-21 putatively functional MHCI sequences in each of the badger species, and 2-7 sequences per individual, indicating the existence of 1-4 loci. MHCI exon 2 and 3 sequences encoding domains α1 and α2 exhibited different clade topologies in phylogenetic networks. Non-synonymous nucleotide substitutions at codons for antigen-binding sites exceeded synonymous substitutions for domain α1 but not for domain α2, suggesting that the domains α1 and α2 likely had different evolutionary histories in these species. Positive selection and recombination seem to have shaped the variation in domain α2, whereas positive selection was dominant in shaping the variation in domain α1. In the separate phylogenetic analyses for exon 2, exon 3, and intron 2, each showed three clades of Meles alleles, with rampant trans-species polymorphism, indicative of the long-term maintenance of ancestral MHCI polymorphism by balancing selection.

In Europe, the range of the golden jackal (Canis aureus) has expanded since the mid‐twentieth century, but little is known about how it interacts with other sympatric carnivores. Among European countries, Bulgaria has the largest population of golden jackals and jackal numbers have increased around two‐fold during the past two decades, particularly in lowland habitats. Larger canids often competitively exclude, or even kill, smaller sympatric ones, especially when guild dynamics are in flux due to population re‐establishment. We therefore investigate whether trophic niche segregation occurs between golden jackals and red foxes (Vulpes vulpes) in central Bulgaria, where both species are sympatric. Because jackals are more abundant in lowland than in upland Bulgaria, we further investigate whether habitat elevation affects the strength of trophic competition. From the analysis of stomach contents of both species, collected from lowland and upland areas during hunting seasons between 1997 and 2009, we found no significant food niche overlap, and no effect of elevation on trophic interactions. In lowland habitat, golden jackals mainly scavenged carcasses of domestic animals, whereas in upland habitat they consumed mostly carcasses of wild ungulates. In contrast, red foxes predominantly and consistently predated rodents in both habitats. This suggests that trophic segregation facilitates the coexistence of these canids under these prevailing population conditions. Nevertheless, we stress that as golden jackals colonize Eastern Europe, impacts on red foxes, and consequences for ecological communities, should be monitored carefully, especially in regions with less carrion available to support jackals.

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