The evolution of land flora transformed the terrestrial environment. Land plants evolved from an ancestral charophycean alga from which they inherited developmental, biochemical, and cell biological attributes. Additional biochemical and physiological adaptations to land, and a life cycle with an alternation between multicellular haploid and diploid generations that facilitated efficient dispersal of desiccation tolerant spores, evolved in the ancestral land plant. We analyzed the genome of the liverwort Marchantia polymorpha, a member of a basal land plant lineage. Relative to charophycean algae, land plant genomes are characterized by genes encoding novel biochemical pathways, new phytohormone signaling pathways (notably auxin), expanded repertoires of signaling pathways, and increased diversity in some transcription factor families. Compared with other sequenced land plants, M. polymorpha exhibits low genetic redundancy in most regulatory pathways, with this portion of its genome resembling that predicted for the ancestral land plant. PAPERCLIP.

Pomacentridae are one of the most abundant fish families inhabiting reefs of tropical and temperate regions. This family, comprising 29 genera, shows a remarkable diversity of habitat preferences, feeding, and behaviours. Twenty-four species belonging to seven genera have been reported in the Eastern Pacific region. The present study focuses on the relationship between the diet and the cephalic profile in the 24 endemic damselfishes of this region. Feeding habits were determined by means of underwater observations and the gathering of bibliographic data. Variations in cephalic profile were analyzed by means of geometric morphometrics and phylogenetic methods. The present study shows that the 24 species can be grouped into three main trophic guilds: zooplanktivores, algivores, and an intermediate group feeding on small pelagic and benthic preys. Shape variations were low within each genus except for Abudefduf. Phylogenetically adjusted regression reveals that head shape can be explained by differences in feeding habits. The morphometric phylogeny recovered the subfamily Stegastinae and the relationship between Abudefduf troschelii and Chromis species. The cephalic profile of damselfishes contains a clear and strong phylogenetic signal.

The recognition of transformed homologues entails an evaluation of similarity of features among taxa and then an assessment of homology by character congruence. We approached the similarity test of character state identity with morphometric analyses of character variation to judge whether all variants from a taxonomic sample belong to the same phylogenetic state (taxic homology) or whether some variants are sufficiently different to recognize them as different states (transformational homology). This method seeks to recognize as many character states as the groups of taxon means that are revealed by an analysis of variance followed by a multiple range test. We exemplify this quantitative approach with an analysis of character variation for a phylogenetic study of eight Artibeus species and two outgroups. All 23 features analysed are taxonomically useful because at least two states could be defined. We argue that statistical tests are a consistent and non‐arbitrary procedure for the similarity test in the assessment of character states when hypothesizing primary homologies. Cladistic analyses and descriptive indices of historical signals of previous molecular and morphological data, combined with our morphometric data, showed that morphometric characters contain cladistic structure and they are phylogeneticaly useful. © 2003 The Linnean Society of London, Biological Journal of the Linnean Society, 2003, 80, 45–55.

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Cichlids of the tribe Heroini have long been a source of taxonomical conflict. In particular, the species included in the Herichthys bartoni group have failed to be recovered as monophyletic in different molecular studies. In this paper we use traditional and geometric morphometrics to evaluate morphological variation in the species included in the H. bartoni complex in order to evaluate the number of species it contains. An update of a previously published DNA barcoding study suggests the existence of three genetic clusters that included the six recognized species analyzed in this study, none of them recovered as monophyletic. On the other hand, geometric morphometrics arise as a useful tool to discriminate species due that traditional morphometrics showed a high overlap in the characters analyzed that prevents the proposal of diagnostic characters.Los cíclidos de la tribu Heroini han experimentado un largo conflicto taxonómico. En particular, las especies incluidas en el grupo Herichthys bartoni no han sido recuperadas como monofiléticas en diversos estudios moleculares. En este artículo nosotros usamos morfometría tradicional y geométrica para evaluar la variación morfológica de las especies incluidas en el complejo H. bartoni para evaluar el numero de especies que contiene. Una actualización de un estudio previo de código de barras de ADN sugiere la existencia de tres grupos genéticos que incluyen las seis especies reconocidas analizadas en este estudio, ninguna de las cuales fue recuperada como monofilética. Por otro lado, la morfometría geométrica surge como una herramienta de utilidad para discriminar especies debido a que la variación en caracteres morfométricos tradicionales muestra altos niveles de solapamiento que previene la propuesta de caracteres diagnósticos.