The distribution, abundance and composition of marine fish assemblages are influenced by changes in behaviour and movement associated with the diel cycle. The majority of studies exploring day-night differences have demonstrated that there is a greater abundance and diversity of fishes during diurnal compared with nocturnal hours, and that fish assemblage composition varies with time of day or night. We investigated fine-scale (hourly) diel cycles in the composition and relative abundance of temperate reef fishes using unbaited remote underwater video systems. We observed short crepuscular changeover periods with the hours around dawn and dusk sharing many species, some of which are nocturnal and others diurnal. Diurnal surveys recorded a greater number of individuals (16,990) and species (70) than nocturnal surveys (1053 individuals and 19 species). There was a clear difference between the diurnal assemblage, which was characterized by benthic invertivores, and the nocturnal assemblage composition, which contained zooplanktivores and generalist feeders. Within the diurnal period the hourly temporal variation was relatively homogenous, indicating that standardization of diurnal sampling to a particular time of day may not be necessary.

Understanding patterns and processes governing biodiversity along broad‐scale environmental gradients, such as depth or latitude, requires an assessment of not just taxonomic richness, but also morphological and functional traits of organisms. Studies of traits can help to identify major selective forces acting on morphology. Currently, little is known regarding patterns of variation in the traits of fishes at broad spatial scales. The aims of this study were (a) to identify a suite of key traits in marine fishes that would allow assessment of morphological variability across broad‐scale depth (50–1200 m) and latitudinal (29.15–50.91°S) gradients, and (b) to characterize patterns in these traits across depth and latitude for 144 species of ray‐finned fishes in New Zealand waters. Here, we describe three new morphological traits, namely fin‐base‐to‐perimeter ratio, jaw‐length‐to‐mouth‐width ratio, and pectoral‐fin‐base‐to‐body‐depth ratio. Four other morphological traits essential for locomotion and food acquisition that are commonly measured in fishes were also included in the study. Spatial ecological distributions of individual fish species were characterized in response to a standardized replicated sampling design, and morphological measurements were obtained for each species from preserved museum specimens. With increasing depth, fishes, on average, became larger and more elongate, with higher fin‐base‐to‐perimeter ratio and larger jaw‐length‐to‐mouth‐width ratio, all of which translates into a more eel‐like anguilliform morphology. Variation in mean trait values along the depth gradient was stronger at lower latitudes for fin‐base‐to‐perimeter ratio, elongation and total body length. Average eye size peaked at intermediate depths (500–700 m) and increased with increasing latitude at 700 m. These findings suggest that, in increasingly extreme environments, fish morphology shifts towards a body shape that favours an energy‐efficient undulatory swimming style and an increase in jaw‐length vs. mouth width for opportunistic feeding. Furthermore, increases in eye size with both depth and latitude indicate that changes in both the average ambient light conditions as well as seasonal variations in day‐length can act to select ecomorphological adaptations in fishes.

Energy and environmental stability are positively correlated with species richness along broad-scale spatial gradients in terrestrial ecosystems, so their relative importance in generating and preserving diversity cannot be readily disentangled. This study seeks to exploit the negative correlation between energy and stability along the oceanic depth gradient to better understand their relative contribution in shaping broadscale biodiversity patterns. We develop a conceptual framework by simulating speciation and extinction along energy and stability gradients to generate expected patterns of biodiversity for a suite of complementary phylogenetic diversity metrics. Using a time-calibrated molecular phylogeny for New Zealand marine ray-finned fishes and a replicated community ecological sampling design, we then modelled these metrics along largescale depth and latitude gradients. Our results indicate that energy-rich shallow waters may be an engine of diversity for percomorphs, but also suggest that recent speciation occurs in ancient fish lineages in the deep sea, hence questioning the role of energy as a key driver of speciation. Despite potentially facing high extinction early in their evolution, ancient phylogenetic lineages specialized for the deep-sea were likely preserved by environmental stability during the Cenozoic. Furthermore, intermediate depths might be a 'museum' (or zone of overlap) for distinct lineages that occur predominantly in either shallow or deep-sea waters. These intermediate depths (500-900 m) may form a 'phylogenetic diversity bank', perhaps providing a refuge during ancient (Mesozoic) extreme anoxic events affecting the deep sea and more recent (Pliocene-Pleistocene) climatic events occurring in shallow ecosystems. Finally, the phylogenetic structures observed in fish communities at intermediate depths suggest other processes might restrict the co-occurrence of closely related species. Overall, by combining a conceptual framework with models of empirical phylogenetic diversity patterns, our study paves the way for understanding the determinants of biodiversity across the largest habitat on earth.

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