A number of morphological and statistical aspects of domain formation in singly and doubly supported ternary membranes have been investigated. Such ternary membranes produce macroscopic phase separation in two fluid phases and are widely used as raft models. We find that membrane interactions with the support surface can have a critical influence on the domain shapes if measures are not taken to screen these interactions. Combined AFM and fluorescence microscopy demonstrate small (500 nm) irregular domains and incomplete formation of much larger (5 microm) round domains. These kinetically trapped structures are the result of interactions between the membrane and the support surface, and they can be effectively removed by employing doubly supported membranes under physiological salt concentrations. These decoupled supported membranes display macroscopic round domains that are easily perturbed by fluid shear flow. The system allows a quantitative characterization of domain coarsening upon being cooled into the coexistence region. We determine the domain growth exponent alpha = 0.31, which is in close agreement with the theoretical value of 1/3. Analysis of the spatial domain pattern in terms of Voronoi polygons demonstrates a close similarity to equilibrated cellular structures with a maximized configurational entropy.
The functioning of synthetic gene circuits depends on their local chemical context defined by the types and concentrations of biomolecules in the surrounding milieu that influences gene transcription and translation. This chemical-context dependence of synthetic gene circuits arises from significant yet unknown cross talk between engineered components, host cells, and environmental factors and has been a persistent challenge for synthetic biology. Here, we show that the sensitivity of synthetic gene networks to their extracellular chemical contexts can be minimized, and their designed functions rendered robust using artificial cells, which are synthetic biomolecular compartments engineered from the bottom-up using liposomes that encapsulate the gene networks. Our artificial cells detect, interact with, and kill bacteria in simulated external environments with different chemical complexity. Our work enables the engineering of synthetic gene networks with minimal dependency on their extracellular chemical context and creates a new frontier in controlling robustness of synthetic biological systems using bioinspired mechanisms.
The popular demonstration involving a permanent magnet falling through a conducting pipe is treated as an axially symmetric boundary value problem. Specifically, Maxwell's equations are solved for an axially symmetric magnet moving coaxially inside an infinitely long, conducting cylindrical shell of arbitrary thickness at nonrelativistic speeds. Analytic solutions for the fields are developed and used to derive the resulting drag force acting on the magnet in integral form. This treatment represents a significant improvement over existing models which idealize the problem as a point dipole moving slowly inside a pipe of negligible thickness. It also provides a rigorous study of eddy currents under a broad range of conditions, and can be used for precision magnetic braking applications. The case of a uniformly magnetized cylindrical magnet is considered in detail, and a comprehensive analytical and numerical study of the properties of the drag force is presented for this geometry. Various limiting cases of interest involving the shape and speed of the magnet and the full range of conductivity and magnetic behavior of the pipe material are investigated and corresponding asymptotic formulas are developed.
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