DeepResolve was capable of resolving high-resolution thin-slice knee MRI from lower-resolution thicker slices, achieving superior quantitative and qualitative diagnostic performance to both conventionally used and state-of-the-art methods.
Purpose To develop a robust multidimensional deep‐learning based method to simultaneously generate accurate neurite orientation dispersion and density imaging (NODDI) and generalized fractional anisotropy (GFA) parameter maps from undersampled q‐space datasets for use in stroke imaging. Methods Traditional diffusion spectrum imaging (DSI) capable of producing accurate NODDI and GFA parameter maps requires hundreds of q‐space samples which renders the scan time clinically untenable. A convolutional neural network (CNN) was trained to generated NODDI and GFA parameter maps simultaneously from 10× undersampled q‐space data. A total of 48 DSI scans from 15 stroke patients and 14 normal subjects were acquired for training, validating, and testing this method. The proposed network was compared to previously proposed voxel‐wise machine learning based approaches for q‐space imaging. Network‐generated images were used to predict stroke functional outcome measures. Results The proposed network achieves significant performance advantages compared to previously proposed machine learning approaches, showing significant improvements across image quality metrics. Generating these parameter maps using CNNs also comes with the computational benefits of only needing to generate and train a single network instead of multiple networks for each parameter type. Post‐stroke outcome prediction metrics do not appreciably change when using images generated from this proposed technique. Over three test participants, the predicted stroke functional outcome scores were within 1–6% of the clinical evaluations. Conclusions Estimates of NODDI and GFA parameters estimated simultaneously with a deep learning network from highly undersampled q‐space data were improved compared to other state‐of‐the‐art methods providing a 10‐fold reduction scan time compared to conventional methods.
Background Super‐resolution is an emerging method for enhancing MRI resolution; however, its impact on image quality is still unknown. Purpose To evaluate MRI super‐resolution using quantitative and qualitative metrics of cartilage morphometry, osteophyte detection, and global image blurring. Study Type Retrospective. Population In all, 176 MRI studies of subjects at varying stages of osteoarthritis. Field Strength/Sequence Original‐resolution 3D double‐echo steady‐state (DESS) and DESS with 3× thicker slices retrospectively enhanced using super‐resolution and tricubic interpolation (TCI) at 3T. Assessment A quantitative comparison of femoral cartilage morphometry was performed for the original‐resolution DESS, the super‐resolution, and the TCI scans in 17 subjects. A reader study by three musculoskeletal radiologists assessed cartilage image quality, overall image sharpness, and osteophytes incidence in all three sets of scans. A referenceless blurring metric evaluated blurring in all three image dimensions for the three sets of scans. Statistical Tests Mann–Whitney U‐tests compared Dice coefficients (DC) of segmentation accuracy for the DESS, super‐resolution, and TCI images, along with the image quality readings and blurring metrics. Sensitivity, specificity, and diagnostic odds ratio (DOR) with 95% confidence intervals compared osteophyte detection for the super‐resolution and TCI images, with the original‐resolution as a reference. Results DC for the original‐resolution (90.2 ± 1.7%) and super‐resolution (89.6 ± 2.0%) were significantly higher (P < 0.001) than TCI (86.3 ± 5.6%). Segmentation overlap of super‐resolution with the original‐resolution (DC = 97.6 ± 0.7%) was significantly higher (P < 0.0001) than TCI overlap (DC = 95.0 ± 1.1%). Cartilage image quality for sharpness and contrast levels, and the through‐plane quantitative blur factor for super‐resolution images, was significantly (P < 0.001) better than TCI. Super‐resolution osteophyte detection sensitivity of 80% (76–82%), specificity of 93% (92–94%), and DOR of 32 (22–46) was significantly higher (P < 0.001) than TCI sensitivity of 73% (69–76%), specificity of 90% (89–91%), and DOR of 17 (13–22). Data Conclusion Super‐resolution appears to consistently outperform naïve interpolation and may improve image quality without biasing quantitative biomarkers. Level of Evidence: 2 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2020;51:768–779.
SS-FSE is a fast technique that does not suffer from off-resonance distortions to the degree that EPI does. Unlike EPI, SS-FSE is ill-suited to diffusion weighted imaging (DWI) due to the Carr-Purcell-Meiboom-Geill (CPMG) condition. Non-CPMG phase cycling does accommodate SS-FSE and DWI but places constraints on reconstruction, which are resolved here through parallel imaging. Additionally, improved echo stability can be achieved by using short duration and highly selective DIVERSE radiofrequency pulses. Here, signal-to-noise ratio (SNR) comparisons between EPI and nCPMG SS-FSE acquisitions and reconstruction techniques give similar values. Diffusion imaging with nCPMG SS-FSE gives similar SNR to an EPI acquisition, though apparent diffusion coefficient values are higher than seen with EPI. In vivo images have good image quality with little distortion. This method has the ability to capture distortion-free DWI images near areas of significant off-resonance as well as preserve adequate SNR. Parallel imaging and DIVERSE refocusing RF pulses allow shorter ETL compared to previous implementations and thus reduces phase encode direction blur and SAR accumulation.
This work presents a diffusion-prepared SS-FSE sequence that is robust against the violation of the CPMG condition while providing diffusion contrast in clinical cases. Magn Reson Med 79:3032-3044, 2018. © 2017 International Society for Magnetic Resonance in Medicine.
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