Starting from 12,000 years ago in the Middle East, the Neolithic lifestyle spread across Europe via separate continental and Mediterranean routes. Genomes from early European farmers have shown a clear Near Eastern/Anatolian genetic affinity with limited contribution from hunter-gatherers. However, no genomic data are available from modern-day France, where both routes converged, as evidenced by a mosaic cultural pattern. Here, we present genome-wide data from 101 individuals from 12 sites covering today’s France and Germany from the Mesolithic (N = 3) to the Neolithic (N = 98) (7000–3000 BCE). Using the genetic substructure observed in European hunter-gatherers, we characterize diverse patterns of admixture in different regions, consistent with both routes of expansion. Early western European farmers show a higher proportion of distinctly western hunter-gatherer ancestry compared to central/southeastern farmers. Our data highlight the complexity of the biological interactions during the Neolithic expansion by revealing major regional variations.

The analysis of lipids (fats, oils and waxes) absorbed within archaeological pottery has revolutionized the study of past diets and culinary practices. However, this technique can lack taxonomic and tissue specificity and is often unable to disentangle signatures resulting from the mixing of different food products. Here, we extract ancient proteins from ceramic vessels from the West Mound of the key early farming site of Çatalhöyük in Anatolia, revealing that this community processed mixes of cereals, pulses, dairy and meat products, and that particular vessels may have been reserved for specialized foods (e.g., cow milk and milk whey). Moreover, we demonstrate that dietary proteins can persist on archaeological artefacts for at least 8000 years, and that this approach can reveal past culinary practices with more taxonomic and tissue-specific clarity than has been possible with previous biomolecular techniques.

Ancient DNA traces the history of hepatitis B Hepatitis B virus (HBV) infections represent a worldwide human health concern. To study the history of this pathogen, Kocher et al . identified 137 human remains with detectable levels of virus dating between 400 and 10,000 years ago. Sequencing and analyses of these ancient viruses suggested a common ancestor between 12,000 and 20,000 years ago. There is no evidence indicating that HBV was present in the earliest humans as they spread out of Africa; however, HBV was likely present in human populations before farming. Furthermore, the virus was present in the Americas by about 9000 years ago, representing a lineage sister to the viral strains found in Eurasia that diverged about 20,000 years ago. —LMZ

A sample of 6098 published prehistoric skeletons consisting of long bone lengths, stature estimated from them using three different methods, as well as recalculated stature data created with other methods, was used to model tempo-spatial variance of stature in the Holocene prehistory of the Near East and Europe. Bayesian additive mixed modeling with errors-in-variables was applied, fitting a global spatiotemporal trend using a tensor product spline approach, a local random effect for the archaeological sites and corrections for mismeasurement and misclassification of covariates to obtain stature isoline maps for various time slices and diachronic stature trend curves for various regions. Models calculated for maximum long bone lengths and for stature are all largely consistent with each other, so Bayesian errors-in-variables models can be regarded as a viable means of smoothing regional and temporal variance in skeletal data as well as in estimation methods so that only robust trends become manifest. In addition to a general northwestsoutheast gradient in stature, tallest stature in Eurasia and declining stature in Iberia confirms archaeogenetic insights. Transition to farming shows stable, decreasing, or even increasing stature depending on the region and the mode of Neolithization, putting into question the common assumption of a general negative effect of Neolithic lifeways on physical health. Particularly, Northern Europe experienced a rise in stature after the 4th millennium BC. Likely caused by both genetics as well as generally improving living conditions, our findings date the origin of the modern NW-SE gradient in stature to around 3000 BC.

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