Tributary bays of the Three Gorges Reservoir (TGR) are suffering from environmental problems, e.g., eutrophication and algae bloom, which could be related to the limited water exchange capacity of the tributary bays. To understand and quantify the water exchange capacity of a tributary bay, this study investigated the water residence time (RT) in a typical tributary bay of TGR, i.e., the Zhuyi Bay (ZB), using numerical simulation and the adjoint method to obtain the RT. The results show that RT of ZB with an annual mean of 16.7 days increases from the bay mouth to the bay top where the maximum can reach 50 days. There is a significant seasonal variation in RT, with higher RT (average 20 days) in spring and autumn and lower RT (average < 5 days) in the summer. The sensitivity experiments show that the TGR water level regulation has a strong influence on RT. The increase in the water level could increase RT of ZB to some extent. Density currents induced by the temperature difference between the mainstream and tributaries play an important role in the water exchange of ZB, while the impacts of the river discharges and winds on RT are insignificant.

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As a result of the inexorable development of the economy and the ever-increasing population, the demand for water in the urban and rural sectors has increased, and this in turn has caused the water quality and eutrophication of the reservoir to become a legitimate concern in the water environment management of river basins. Phosphorus (P) is one of the limiting nutrients in aquatic ecosystems; P in the sediment is a primary factor for eutrophication. Yuecheng Reservoir is located in one of the most productive and intensively cultivated agricultural regions in North China. Detailed knowledge of the sediment is lacking at this regional reservoir. The first study to look into the different P fractions and its diffusion fluxes at the water sediment interface of the Yuecheng Reservoir makes it possible to learn about the internal P loading. According to the results, the concentrations of total phosphorus (TP) ranged from 1576.3 to 2172.6 mg kg and the P fraction concentration sequence is as follows: P associated with calcium (Ca–Pi) > organic P (Po) > P bound to aluminum (Al), ferrum (Fe) and manganese (Mn) oxides and hydroxides (Fe/Al–Pi). The results demonstrated that, although the construction of a large number of water conservancy projects in the upper reaches of the river resulted in the decrease of inflow runoff, the pollutions from terrestrial plants or materials played a key role in the sediment phosphorus fraction, and they should be emphasized on the water environment management of river basin.

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