Endoparasitic root-knot (Meloidogyne spp.) and lesion (Pratylenchus spp.) nematodes cause considerable damage in agriculture. Before they invade roots to complete their life cycle, soil microbes can attach to their cuticle or surface coat and antagonize the nematode directly or by induction of host plant defenses. We investigated whether the nematode-associated microbiome in soil differs between infective stages of Meloidogyne incognita and Pratylenchus penetrans, and whether it is affected by variation in the composition of microbial communities among soils. Nematodes were incubated in suspensions of five organically and two integrated horticultural production soils, recovered by sieving and analyzed for attached bacteria and fungi after washing off loosely adhering microbes. Significant effects of the soil type and nematode species on nematode-associated fungi and bacteria were revealed as analyzed by community profiling using denaturing gradient gel electrophoresis. Attached microbes represented a small specific subset of the soil microbiome. Two organic soils had very similar bacterial and fungal community profiles, but one of them was strongly suppressive towards root-knot nematodes. They were selected for deep amplicon sequencing of bacterial 16S rRNA genes and fungal ITS. Significant differences among the microbiomes associated with the two species in both soils suggested specific surface epitopes. Among the 28 detected bacterial classes, Betaproteobacteria, Bacilli and Actinobacteria were the most abundant. The most frequently detected fungal genera were Malassezia, Aspergillus and Cladosporium. Attached microbiomes did not statistically differ between these two soils. However, Malassezia globosa and four fungal species of the family Plectosphaerellaceae, and the bacterium Neorhizobium galegae were strongly enriched on M. incognita in the suppressive soil. In conclusion, the highly specific attachment of microbes to infective stages of phytonematodes in soil suggested an ecological role of this association and might be involved in soil suppressiveness towards them.

Several studies were carried out to determine (i) thermal requirements for development, egg production and emergence of juveniles, and completion of the life cycle of Meloidogyne incognita and Meloidogyne javanica on cucumber, (ii) the maximum multiplication rate and the equilibrium density of root-knot nematodes on cucumber and yield losses in pot and plastic greenhouse experiments, and (iii) the relationships between relative leaf chlorophyll content (RLCC) and relative cucumber dry top weight biomass (RDTWB) in relation to increasing nematode densities at planting (P-i) in pot experiments. Thermal requirements of M.incognita and M.javanica on cucumber did not differ, irrespective of the biological stage. In the pot experiments, M.javanica completed one generation. The maximum multiplication rate (a) was 833, and the equilibrium density (E) varied according to the effective inoculum densities. The relationship between RDTWB and P-i fitted the Seinhorst damage function model. The RLCC value at 40 or 50days post-inoculation also fitted the damage model and was related to RDTWB. In greenhouse experiments, conducted from 2009 to 2012, M.incognita completed three generations. The values for a and E were 1147 and 625second stage juveniles (J2) per 250cm(3) soil, respectively. The tolerance limit was below zero, and the minimum relative yield ranged from 012 to 034.Postprint (published version

Meloidogyne spp. are the most damaging plant parasitic nematodes for horticultural crops worldwide. Pochonia chlamydosporia is a fungal egg parasite of root-knot and cyst nematodes able to colonize the roots of several plant species and shown to induce plant defense mechanisms in fungal-plant interaction studies, and local resistance in fungal-nematode-plant interactions. This work demonstrates the differential ability of two out of five P. chlamydosporia isolates, M10.43.21 and M10.55.6, to induce systemic resistance against M. incognita in tomato but not in cucumber in split-root experiments. The M10.43.21 isolate reduced infection (32–43%), reproduction (44–59%), and female fecundity (14.7–27.6%), while the isolate M10.55.6 only reduced consistently nematode reproduction (35–47.5%) in the two experiments carried out. The isolate M10.43.21 induced the expression of the salicylic acid pathway ( PR-1 gene) in tomato roots 7 days after being inoculated with the fungal isolate and just after nematode inoculation, and at 7 and 42 days after nematode inoculation too. The jasmonate signaling pathway ( Lox D gene) was also upregulated at 7 days after nematode inoculation. Thus, some isolates of P. chlamydosporia can induce systemic resistance against root-knot nematodes but this is plant species dependent.

4 5Experiments were conducted to determine the effectiveness and profitability of the Mi-6 resistance gene on tomato in suppressing populations of Meloidogyne javanica in a plastic-7 house with a natural infestation of the nematode. Experiments were also conducted to test 8 for virulence and durability of the resistance. Monika (Mi-gene resistant) and Durinta 9 (susceptible) tomato cultivars were cropped for three consecutive seasons in non-fumigated 10 or in soil fumigated with methyl bromide at 75 g m -2 and at a cost of 2.44 euros m -2 . 11

A population of Meloidogyne javanica virulent to Mi-gene in tomato was identified in Spain. It reproduced similarly on resistant and susceptible tomato cultivars in the greenhouse, microplots, and in the field. In monoxenic cultures, reproduction of the virulent M. javanica was higher than that of an avirulent population on resistant but not on susceptible tomatoes. The virulent population suppressed tomato yield of both resistant and susceptible tomatoes by 29% in microplots. Initial population density (Pi) was inversely correlated with Pf (final population density)/Pi on both resistant and susceptible tomatoes in the field. A negative correlation was found between Pi and tomato yield for the susceptible but not for the resistant cultivar.