Purpose To present a new optimition‐driven design of optimal k‐space trajectories in the context of compressed sensing: Spreading Projection Algorithm for Rapid K‐space sampLING (SPARKLING). TheoryThe SPARKLING algorithm is a versatile method inspired from stippling techniques that automatically generates optimized sampling patterns compatible with MR hardware constraints on maximum gradient amplitude and slew rate. These non‐Cartesian sampling curves are designed to comply with key criteria for optimal sampling: a controlled distribution of samples (e.g., variable density) and a locally uniform k‐space coverage. MethodsEx vivo and in vivo prospective T2*‐weighted acquisitions were performed on a 7‐Tesla scanner using the SPARKLING trajectories for various setups and target densities. Our method was compared to radial and variable‐density spiral trajectories for high‐resolution imaging. ResultsCombining sampling efficiency with compressed sensing, the proposed sampling patterns allowed up to 20‐fold reductions in MR scan time (compared to fully sampled Cartesian acquisitions) for two‐dimensional T2*‐weighted imaging without deterioration of image quality, as demonstrated by our experimental results at 7 Tesla on in vivo human brains for a high in‐plane resolution of 390 μm. In comparison to existing non‐Cartesian sampling strategies, the proposed technique also yielded superior image quality. ConclusionsThe proposed optimization‐driven design of k‐space trajectories is a versatile framework that is able to enhance MR sampling performance in the context of compressed sensing.
Parallel transmission (pTx) technology, despite its great potential to mitigate the transmit field inhomogeneity problem in magnetic resonance imaging at ultra-high field (UHF), suffers from a cumbersome calibration procedure, thereby making the approach problematic for routine use. The purpose of this work is to demonstrate on two different 7T systems respectively equipped with 8-transmit-channel RF coils from two different suppliers (Rapid-Biomed and Nova Medical), the benefit of so-called universal pulses (UP), optimized to produce uniform excitations in the brain in a population of adults and making unnecessary the calibration procedures mentioned above. Non-selective and slice-selective UPs were designed to return homogeneous excitation profiles throughout the brain simultaneously on a group of ten subjects, which then were subsequently tested on ten additional volunteers in magnetization prepared rapid gradient echo (MPRAGE) and multi-slice gradient echo (2D GRE) protocols. The results were additionally compared experimentally with the standard non-pTx circularly-polarized (CP) mode, and in simulation with subject-specific tailored excitations. For both pulse types and both coils, the UP mode returned a better signal and contrast homogeneity than the CP mode. Retrospective analysis of the flip angle (FA) suggests that the FA deviation from the nominal FA on average over a healthy adult population does not exceed 11% with the calibration-free parallel-transmit pulses whereas it goes beyond 25% with the CP mode. As a result the universal pulses designed in this work confirm their relevance in 3D and 2D protocols with commercially available equipment. Plug-and-play pTx implementations henceforth become accessible to exploit with more flexibility the potential of UHF for brain imaging.
Structural microtubule associated proteins (MAPs) stabilize microtubules, a property that was thought to be essential for development, maintenance and function of neuronal circuits. However, deletion of the structural MAPs in mice does not lead to major neurodevelopment defects. Here we demonstrate a role for MAP6 in brain wiring that is independent of microtubule binding. We find that MAP6 deletion disrupts brain connectivity and is associated with a lack of post-commissural fornix fibres. MAP6 contributes to fornix development by regulating axonal elongation induced by Semaphorin 3E. We show that MAP6 acts downstream of receptor activation through a mechanism that requires a proline-rich domain distinct from its microtubule-stabilizing domains. We also show that MAP6 directly binds to SH3 domain proteins known to be involved in neurite extension and semaphorin function. We conclude that MAP6 is critical to interface guidance molecules with intracellular signalling effectors during the development of cerebral axon tracts.
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