Darwin's letters and some rough notes found in his field notebooks of 1835 confirm the statement in his Autobiography that he had formulated his theory of coral reef formation before the Beagle left South America and before he had seen a coral reef. His geological observations having convinced him of the elevation of the South American continent, Darwin predicted that evidence of a compensatory gradual subsidence of the Pacific Ocean floor would be found in the existence of shallow-water coral genera in the Pacific reef formations. The first draft of the theory was written on board the Beagle shortly after seeing the reefs of Moorea in November 1835. After visiting the Cocos (Keeling) Islands he wrote a summary of his view in a letter of April 1838, in which he expressed his conviction that he had found an explanation which would "put some of the facts in a more simple and connected point of view, than that in which they have hitherto been considered".

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