Multi-class image segmentation has made significant advances in recent years through the combination of local and global features. One important type of global feature is that of inter-class spatial relationships. For example, identifying "tree" pixels indicates that pixels above and to the sides are more likely to be "sky" whereas pixels below are more likely to be "grass." Incorporating such global information across the entire image and between all classes is a computational challenge as it is image-dependent, and hence, cannot be precomputed.In this work we propose a method for capturing global information from inter-class spatial relationships and encoding it as a local feature. We employ a two-stage classification process to label all image pixels. First, we generate predictions which are used to compute a local relative location feature from learned relative location maps. In the second stage, we combine this with appearance-based features to provide a final segmentation. We compare our results to recent published results on several multiclass image segmentation databases and show that the incorporation of relative location information allows us to significantly outperform the current state-of-the-art.

Genome-wide expression profiles of genetic mutants provide a wide variety of measurements of cellular responses to perturbations. Typical analysis of such data identifies genes affected by perturbation and uses clustering to group genes of similar function. In this paper we discover a finer structure of interactions between genes, such as causality, mediation, activation, and inhibition by using a Bayesian network framework. We extend this framework to correctly handle perturbations, and to identify significant subnetworks of interacting genes. We apply this method to expression data of S. cerevisiae mutants and uncover a variety of structured metabolic, signaling and regulatory pathways.

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