Throughout the Midwest United States, agricultural and urban development have fragmented natural areas, with a disproportionate effect on forests and wetlands. The resulting habitat loss, compounded with the spread of white-nose syndrome (WNS), has caused precipitous population declines in several forest-obligate bat species. In 2019, we discovered a remnant northern long-eared bat (Myotis septentrionalis Trouessart) maternity colony in a small forest fragment adjacent to a restored wetland in northeastern Indiana, USA. We investigated roost selection in this colony during the summers between 2019 and 2021 by attaching radio transmitters to northern long-eared bats and tracking them to day roosts. We measured tree, plot, and landscape-level characteristics for each roost and for a randomly selected available tree in the same landscape, then compared characteristics using paired t-tests. Over 70 net nights, we captured and tracked 4 individuals (1 juvenile male, 1 post-lactating female, and 2 lactating females) to 12 different roosts. There were, on average, 3.5 times more standing dead trees (snags) in plots around roosts compared to available trees (t = −4.17, p = 0.02). Bats in this maternity colony selected roosts near a stretch of flooded forest (which contained 83% of roosts) dominated by solar-exposed, flood-killed snags. These roosts likely provide warm microclimates that facilitate energy retention, fetal development, and milk production. By describing roosts within this landscape, we provide insight into the resources that enable an endangered bat species to persist in urbanized forest fragments.