Electrospun membranes have shown promise for use in membrane distillation (MD) as they exhibit exceptionally low vapor transport. Their high porosity coupled with the occasional large pore can make them prone to wetting. In this work, initiated chemical vapor deposition (iCVD) is used to modify for electrospun membranes with increased hydrophobicity of the fiber network. To demonstrate conformal coating, we demonstrate the approach on intrinsically hydrophilic electrospun fibers and render the fibers suitable for MD. We enable conformal coating using a unique coating procedure, which provides convective flow of deposited polymers during iCVD. This is made possible by using a 3D printed scaffold, which changed the orientation of the membrane during the coating process. The new coating orientation allows both sides as well as the interior of the membrane to be coated simultaneously and reduced the coating time by a factor of 10 compared to conventional CVD approaches. MD testing confirmed the hydrophobicity of the material as 100% salt rejections were obtained.