Rapid identification of agronomically important genes is of pivotal interest for crop breeding. One source of such genes are crop wild relative (CWR) populations. Here we used a CWR population of <200 wild beets (B. vulgaris ssp. maritima), sampled in their natural habitat, to identify the sugar beet (Beta vulgaris ssp. vulgaris) resistance gene Rz2 with a modified version of mapping-by-sequencing (MBS). For that, we generated a draft genome sequence of the wild beet. Our results show the importance of preserving CWR in situ and demonstrate the great potential of CWR for rapid discovery of causal genes relevant for crop improvement. The candidate gene for Rz2 was identified by MBS and subsequently corroborated via RNA interference (RNAi). Rz2 encodes a CC-NB-LRR protein. Access to the DNA sequence of Rz2 opens the path to improvement of resistance towards rhizomania not only by marker-assisted breeding but also by genome editing.

Increasing genetic variation beyond natural variation is an important aim in plant breeding. In the past 70 years, random mutagenesis by irradiation or by chemicals has created numerous mutants which have been frequently used in breeding. However, their application is hampered by the mutational load due to many background mutations. In the past 10 years, new techniques for site-directed mutagenesis have been introduced to plant breeding which are commonly referred to as "genome editing." Among these, the CRISPR/Cas9 system turned out to be the most efficient and easy to apply. DNA is cleaved by a nuclease precisely at a target site where a mutation is likely to be beneficial. The DNA is healed by the cellular repair system either by error-prone non-homologous end joining or by homologous recombination, by which small DNA fragments can be inserted at the target site. In this review, we describe the application of targeted mutagenesis to crop plants and the modification of agronomically important traits, which could have direct impacts on plant breeding.