Seasonal concentrations of total, particulate and dissolved Al, Cu, Cd, Cr, Fe, Pb and Ni were analyzed in surface water and total metals in sediment samples from black and whitewater rivers within the Itacoatiara City, Central Amazon. Metals concentrations in water and sediment samples demonstrated that even though urbanization and agricultural practices are common in this region. Metal concentrations in sediments samples are acceptable regarding the recommended levels for protection of aquatic life. From this work, which is the first trace elements study in the main tributaries from Itacoatiara region, we conclude that metals are present in a particulate form, being easier to be transported to other aquatic bodies. During flooding periods an increase of Al, Fe and total organic compound (TOC) in almost water sampling points was observed.