Plipastatin is a cyclic lipopeptide synthesized by non-ribosomal
peptide synthetases (NRPS), which has a diverse range of applications
in postharvest preservation of fruits and vegetables, biological control,
and feed processing. Whereas the yield of plipastatin in wild Bacillus sp. is low, its chemical structure is complex and
challenging to synthesize, significantly limiting its production and
application. ComQXPA-PsrfA, a quorum-sensing (QS) circuit
from Bacillus amyloliquefaciens, was
constructed in this study. Two QS promoters MuPsrfA and
MtPsrfA, with 35 and 100% increased activity, respectively,
were obtained by mutating the original promoter PsrfA.
Thus, the natural promoter of plipastatin was replaced by a QS promoter
to achieve the dynamic regulation of plipastatin, which increased
the yield of plipastatin by 3.5 times. Integrating ComQXPA into plipastatin
mono-producing M-24:MtPsrfA increased the yield of plipastatin
to 3850 mg/L, representing the highest yield reported to date. Four
new plipastatins were identified via UPLC-ESI-MS/MS
and GC–MS analysis of fermentation products of mono-producing
engineered strains. Among them, three plipastatins contained two double
bonds in the fatty acid side chain, representing the first example
of a new type of plipastatin. Our results indicate that the QS system
ComQXPA-PsrfA of Bacillus can dynamically
regulate plipastatin production, and the pipeline could be extended
to the other strains to regulate target products dynamically.
In the present study, a feruloyl esterase DLFae4 identified in our previous research was modified by error-prone PCR and site-directed saturation mutation to enhance the catalytic efficiency and acyltransferase activity further. Five mutants with 6.9–118.9% enhanced catalytic activity toward methyl ferulate (MFA) were characterized under the optimum conditions. Double variant DLFae4-m5 exhibited the highest hydrolytic activity (270.97 U/mg), the Km value decreased by 83.91%, and the Kcat/Km value increased by 6.08-fold toward MFA. Molecular docking indicated that a complex hydrogen bond network in DLFae4-m5 was formed, with four of five bond lengths being shortened compared with DLFae4, which might account for the increase in catalytic activity. Acyl transfer activity assay revealed that the activity of DLFae4 was as high as 1550.796 U/mg and enhanced by 375.49% (5823.172 U/mg) toward 4-nitrophenyl acetate when residue Ala-341 was mutated to glycine (A341G), and the corresponding acyl transfer efficiency was increased by 7.7 times, representing the highest acyltransferase activity to date, and demonstrating that the WGG motif was pivotal for the acyltransferase activity in family VIII carboxylesterases. Further experiments indicated that DLFae4 and variant DLFae4 (A341G) could acylate cyanidin-3-O-glucoside effectively in aqueous solution. Taken together, our study suggested the effectiveness of error-prone PCR and site-directed saturation mutation to increase the specific activity of enzymes and may facilitate the practical application of this critical feruloyl esterase.
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