Incidence rates of tree damage are increasing because of the increased intensity and frequency of abnormal climate events such as strong winds and heavy rains. Structural defects inside trees are difficult to detect by visual inspection; therefore, it is difficult to respond to them in advance based on prediction. Noninvasive sonic tomography (SoT) is a method that estimates internal defects while minimizing physical damage to trees; however, its accuracy differs depending on the species. Therefore, in this study, we aimed to compare the performance of noninvasive SoT and invasive resistance micro-drilling (RM) in detecting tree damage in oriental white oak (Quercus aliena Blume) distributed in East Asia and performed wood section analysis to verify the accuracy of noninvasive SoT. Linear regression analysis showed that defects in tomograms tended to increase with an increase in the number of defects in the RM profile, but the value of R2 was 0.405, which is lower than that of other tree species. The results from the wood section analysis and SoT were compared; the SoT tomograms appropriately reflected the location and size of the defects with a tendency to overestimate the defects when cracks were present, while the electric resistance tomography was effective for detecting incipient decay.