All the known rational boundary states for Gepner models can be regarded as permutation branes. On general grounds, one expects that topological branes in Gepner models can be encoded as matrix factorisations of the corresponding Landau-Ginzburg potentials. In this paper we identify the matrix factorisations associated to arbitrary B-type permutation branes.

We compare two applications of the gauge/gravity correspondence to a non conformal gauge theory, based respectively on the study of D-branes wrapped on supersymmetric cycles and of fractional D-branes on orbifolds. We study two brane systems whose geometry is dual to N=4, D=2+1 super Yang-Mills theory, the first one describing D4-branes wrapped on a two-sphere inside a Calabi-Yau two-fold and the second one corresponding to a system of fractional D2/D6-branes on the orbifold R^4/Z_2. By probing both geometries we recover the exact perturbative running coupling constant and metric on the moduli space of the gauge theory. We also find a general expression for the running coupling constant of the gauge theory in terms of the "stringy volume" of the two-cycle which is involved in both types of brane systems.Comment: AMS-LaTeX, 35 pages, no figures. Minor typos corrected, version to appear in NP

We show that B-type Π-stable D-branes do not in general reduce to the (Gieseker-) stable holomorphic vector bundles used in mathematics to construct moduli spaces. We show that solutions of the almost Hermitian Yang-Mills equations for the non-linear deformations of Yang-Mills instantons that appear in the low-energy geometric limit of strings exist iff they are π-stable, a geometric large volume version of Π-stability. This shows that π-stability is the correct physical stability concept. We speculate that this string-canonical choice of stable objects, which is encoded in and derived from the central charge of the string-algebra, should find applications to algebraic geometry where there is no canonical choice of stable geometrical objects. * hakon.enger@fys.uio.no † lutken@fys.uio.no 1 Some features of moduli spaces of µ-stable bundles were reviewed by Sharpe [1].