Simulations with adaptive time-dependent bias enable
an efficient
exploration of the conformational space of a system. However, the
dynamic information is altered by the bias. Infrequent metadynamics
recovers the transition rate of crossing a barrier, if the collective
variables are ideal and there is no bias deposition near the transition
state. Unfortunately, these conditions are not always fulfilled. To
overcome these limitations, and inspired by single-molecule force
spectroscopy, we use Kramers’ theory for calculating the barrier-crossing
rate when a time-dependent bias is added to the system. We assess
the efficiency of collective variables parameter
by measuring how efficiently the bias accelerates the transitions.
We present approximate analytical expressions of the survival probability,
reproducing the barrier-crossing time statistics and enabling the
extraction of the unbiased transition rate even for challenging cases.
We explore the limits of our method and provide convergence criteria
to assess its validity.
Energy conversion is most efficient for micro or nano machines with tight coupling between input and output power. To reach meaningful amounts of power, ensembles of N such machines must be considered. We use a model system to demonstrate that interactions between N tightly coupled nanomachines can enhance the power output per machine. Furthermore, while interactions break tight coupling and thus lower efficiency in finite ensembles, the macroscopic limit (N → ∞) restores it and enhances both the efficiency and the output power per nanomachine.
We study the efficiency fluctuations of a stochastic heat engine made of N interacting unicyclic machines and undergoing a phase transition in the macroscopic limit. Depending on N and on the observation time, the machine can explore its whole phase space or not. This affects the engine efficiency that either strongly fluctuates on a large interval of equiprobable efficiencies (ergodic case) or fluctuates close to several most likely values (nonergodic case). We also provide a proof that despite the phase transition, the decay rate of the efficiency distribution at the reversible efficiency remains largest one although other efficiencies can now decay equally fast.
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