Background Acute blood glucose (BG) decompensations (hypoglycemia and hyperglycemia) represent a frequent and significant risk for inpatients and adversely affect patient outcomes and safety. The increasing need for BG management in inpatients poses a high demand on clinical staff and health care systems in addition. Objective This study aimed to generate a broadly applicable multiclass classification model for predicting BG decompensation events from patients’ electronic health records to indicate where adjustments in patient monitoring and therapeutic interventions are required. This should allow for taking proactive measures before BG levels are derailed. Methods A retrospective cohort study was conducted on patients who were hospitalized at a tertiary hospital in Bern, Switzerland. Using patient details and routine data from electronic health records, a multiclass prediction model for BG decompensation events (<3.9 mmol/L [hypoglycemia] or >10, >13.9, or >16.7 mmol/L [representing different degrees of hyperglycemia]) was generated based on a second-level ensemble of gradient-boosted binary trees. Results A total of 63,579 hospital admissions of 38,250 patients were included in this study. The multiclass prediction model reached specificities of 93.7%, 98.9%, and 93.9% and sensitivities of 67.1%, 59%, and 63.6% for the main categories of interest, which were nondecompensated cases, hypoglycemia, or hyperglycemia, respectively. The median prediction horizon was 7 hours and 4 hours for hypoglycemia and hyperglycemia, respectively. Conclusions Electronic health records have the potential to reliably predict all types of BG decompensation. Readily available patient details and routine laboratory data can support the decisions for proactive interventions and thus help to reduce the detrimental health effects of hypoglycemia and hyperglycemia.
Laboratory medicine is a digital science. Every large hospital produces a wealth of data each day—from simple numerical results from, e.g., sodium measurements to highly complex output of “-omics” analyses, as well as quality control results and metadata. Processing, connecting, storing, and ordering extensive parts of these individual data requires Big Data techniques. Whereas novel technologies such as artificial intelligence and machine learning have exciting application for the augmentation of laboratory medicine, the Big Data concept remains fundamental for any sophisticated data analysis in large databases. To make laboratory medicine data optimally usable for clinical and research purposes, they need to be FAIR: findable, accessible, interoperable, and reusable. This can be achieved, for example, by automated recording, connection of devices, efficient ETL (Extract, Transform, Load) processes, careful data governance, and modern data security solutions. Enriched with clinical data, laboratory medicine data allow a gain in pathophysiological insights, can improve patient care, or can be used to develop reference intervals for diagnostic purposes. Nevertheless, Big Data in laboratory medicine do not come without challenges: the growing number of analyses and data derived from them is a demanding task to be taken care of. Laboratory medicine experts are and will be needed to drive this development, take an active role in the ongoing digitalization, and provide guidance for their clinical colleagues engaging with the laboratory data in research.
BACKGROUND The increasing need for blood glucose (BG) management in hospitalized patients poses high demands on clinical staff and health care systems alike. Acute decompensations of BG levels (hypo- and hyperglycemia) adversely affect patient outcomes and safety. OBJECTIVE Acute BG decompensations pose a frequent and significant risk for inpatients. Ideally, proactive measures are taken before BG levels derail. We have generated a broadly applicable multiclass classification model for predicting decompensation events from patients’ electronic health records to indicate where adjustments of patient monitoring and/or therapeutic interventions are required. METHODS A retrospective cohort study was conducted of patients hospitalized at a tertiary hospital in Bern, Switzerland. Using patient details and routine data from electronic health records (EHRs), a multiclass prediction model for BG decompensation events (< 3.9 mmol/L (hypoglycemia), or > 10, > 13.9, or > 16.7 mmol/L (representing different degrees of hyperglycemia)) was generated, based on a second-level ensemble of gradient-boosted binary trees. RESULTS 63’579 hospital admissions of 33’212 patients were included in this study. The multiclass prediction model reached a specificity of 93.0%, 98.5%, and 93.6% and a sensitivity of 69.6%, 63.0%, and 65.5%, for the main categories of interest. i.e., non-decompensated cases, hypo- or hyperglycemia, respectively. The median prediction horizon was seven and four hours for hypo- and hyperglycemia, respectively. CONCLUSIONS EHRs hold the potential to reliably predict all kinds of BG decompensations. Readily available patient details and routine laboratory data can support the decisions for proactive interventions and thus help to reduce the detrimental health effects of hypo- and hyperglycemia.
Purpose: Swiss BioRef is a nation-wide multicenter infrastructure project, the aim of which is to become a sustainable framework for the estimation and assessment of patient-group-specific reference intervals in laboratory medicine and beyond. In this unprecedented effort, nation-wide multidimensional data from multiple clinical laboratory databases has been combined under the common interoperable semantic framework of the Swiss Personalized Health Network (SPHN) initiative. The consolidated effort enables creating extremely detailed patient group-specific queries via intuitive web applications, allowing the generation of individualised, covariate adjusted reference intervals on-the-fly. Participants: The project is a collaborative effort of four major hospitals in Switzerland, the University Hospital Bern (Inselspital, Insel), University Hospital Lausanne (CHUV), Swiss Spinal Cord Injury Cohort (SwiSCI) and the University Children's Hospital Zurich (KiSpi), and two academic groups in Bern and in Lausanne. Findings to date: Within the infrastructure we deployed, the laboratory data from four major hospitals (approximately 9 million measurements from 250'000 patients) is made available to two conceptually different web applications (one centralised and statistically detailed, one decentralised using distributed computing). They enable the inference of reference intervals for more than 40 blood test variables from clinical chemistry, hematology, point-of-care-testing and coagulation testing, with various patient factors (such as age, sex and a combination of ICD-10 defined diagnoses) and analytical factors (such as type or unique identifiers) that can be used to generate precise reference intervals for the respective groups. Future plans: Now that all required basic infrastructure elements for Swiss BioRef are deployed, we are evaluating inter-cohort transferability of semantic standards, change tracking in merged databases and biological variation of the blood test variables, in order to generate precise reference intervals. While adjusting the developed web-interfaces to suit the needs of the various end-users, we additionally plan to onboard new national and international partners.
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