Two new species of Rhinogobius found in streams on central part of Palawan Island, Philippines are described. The two new species, Rhinogobius estrellae and Rhinogobius tandikan share unique transverse rows of sensory papillae on the cheek with Rhinogobius similis Gill, 1859, but differ from the latter in fin ray counts, arrangement of the scales, etc. The two new species are distinguished from each other by the pectoral-fin ray count, the longitudinal- and predorsal-scale counts, and colouration of the body. Rhinogobius estrellae new species and R. tandikan new species have been found allopatrically in a stream within Malatgao River system flowing into the Sulu Sea and in the Cayulo River flowing into the South China Sea, respectively. The Malatgao River system is the southernmost habitat of the genus Rhinogobius. Rhinogobius similis had been considered as the only member of the most basal lineage of this genus, but our mitochondrial genome analysis suggested that the two new species are additional members of this lineage. They are considered to be relicts of their common ancestor with R. similis, which probably had a wider distribution.

Palawan is an island in the western Philippines, and the freshwater fish fauna of this island has received limited research attention. In the present study, a new goby species, Stiphodon palawanensis, is described on the basis of 57 specimens collected from freshwater streams on the island. This species can be distinguished from its congeners by having nine segmented rays in the second dorsal fin, 15 rays in the pectoral fin, a pointed first dorsal fin in males, premaxilla with 45-71 tricuspid teeth, the nape and posterior half of the occipital region covered by cycloid scales, 9-11 dusky transverse bars laterally on the trunk and tail, a line of black blotches (in male) or a black band (in female) on the distal part of the second dorsal fin, and the first dorsal and pectoral fins lacking distinctive markings. The new species has been found only on the Sulu Sea side of central Palawan. Three congeners, S. percnopterygionus, S. atropurpureus, and S. pulchellus have also been recorded from Palawan.

We document four male colour morphs of the Indo-Pacific goby genus Lentipes in Japan and the Philippines. Despite distinctive colour patterns, males of the different morphs could not be distinguished by meristic or morphometric charactres. In contrast, co-occurring females had very similar colouration and could not be sorted into different types. We observed that the four types are not distinguished by mitochondrial genome sequences. On the other hand, genome-wide SNPs analysis clearly separated the four types, suggesting that they indeed represent four independent lineages. We considered that the four lineages could have diverged recently, and therefore, the sorting of mitochondrial haplotypes may not have been completed yet. One of the four lineages is identified as L. armatus Sakai & Nakamura, 1979, and the other three are described in this study as new species: L. kijimuna, L. bunagaya, and L. palawanirufus. We observed that males display their species-specific body colourations during courtship. Pre-zygotic isolation due to female preferences for different male body colours is probably the primary mechanism of reproductive isolation between the four species.

The seas of Southeast Asia are home to some of the world’s most diverse ecosystems and resources that support the livelihoods and wellbeing of millions of people. Climate change will bring temperature changes, acidification and other environmental change, with uncertain consequences for human and natural systems in the region. We present the first regional-scale projections of change in the marine environment up to the end of 21st century. A coupled physical-biogeochemical model with a resolution of 0.1° (approximately 11 km) was used to create projections of future environmental conditions under two greenhouse gas scenarios, RCP4.5 and RCP8.5. These show a sea that is warming by 1.1–2.9°C through the 21st century, with surface pH falling by up to 0.02 and dissolved oxygen decreasing by 5 to 13 mmol m− 3. Changes for different parts of the region, including four sensitive coastal sites, are presented. The changes reach all parts of the water column and many places are projected to experience conditions well outside the range seen at the start of the century. Altered species distribution and damage to coral reefs resulting from this environmental change would have consequences for biodiversity, for the livelihoods of small-scale fishers and for the food security of coastal communities across the region. Projections of this type are a key tool for communities planning how they will adapt to the challenge of climate change.

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