Background The size of lime material is vital for the efficiency of ameliorating soil acidity, thereby influencing soil biochemical processes. However, the effects of different sized lime material application on soil organic carbon (SOC) mineralization are yet to be elucidated. Therefore, a 35-day incubation experiment was conducted to determine the effects of three particle size fractions (0.5 to 0.25, 0.25 to 0.15, and < 0.15 mm) of dolomite on SOC mineralization of two acidic paddy soils. Results CO2 emission was increased by 3–7%, 11–21%, and 32–49% for coarse-, medium-, and fine-sized dolomite treatments, respectively, compared to the control in both soils. They also well conformed to a first-order model in all treatments, and the estimated decomposition rate constant was significantly higher in the fine-sized treatment than that of other treatments (P < 0.05), indicating that SOC turnover rate was dependent on the dolomite size. The finer particle sizes were characterized with higher efficiencies of modifying soil pH, consequently resulting in higher dissolved organic carbon contents and microbial biomass carbon, eventually leading to higher CO2 emissions. Conclusions The results demonstrate that the size of dolomite is a key factor in regulating SOC mineralization in acidic paddy soils when dolomite is applied to manipulate soil pH.

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