A survey was conducted in major yam cultivation zones in Côte d'Ivoire in 2009 to determine the incidence, severity of viral diseases, and viruses associated with the infected plants. Incidence and severity of the viral diseases were estimated based on symptoms. Enzyme-linked immunosorbent assay (ELISA) and polymerase chain reaction (PCR)-based techniques were used for the detection of Yam mosaic virus (YMV), Cucumber mosaic virus (CMV), Dioscorea mottle virus (DMoV) and yam badnaviruses in the sampled yam leaves. Disease incidence varied from 0 to 90% and symptom severity from 1 to 5. There were significant difference in incidence and severity between different agro-ecological zones (P<0.001). About 36% of the samples tested positive to YMV, ca. 1.5% tested positive to CMV, ca. 39.1% samples tested positive to yam infecting badnaviruses, and none of the samples tested positive to DMoV. This study demonstrated high incidence of virus diseases in all the yam production regions and warrants implementation of virus disease control measures.

Surveys for the Côte d'Ivoire lethal yellowing (CILY) phytoplasma were conducted in eight severely CILY-affected villages of Grand-Lahou in 2015. Leaves, inflorescences and trunk borings were collected from coconut palms showing CILY symptoms and from symptomless trees. Total DNA was extracted from these samples and tested by nested polymerase chain reaction/RFLP and sequence analysis of the 16S rRNA, ribosomal protein (rp) and the translocation protein (secA) genes. The CILY phytoplasma was detected in 82.9% of the symptom-bearing palms collected from all the surveyed villages and from all the plant parts. Trunk borings were recommended as the most suitable plant tissue type for sampling. Results indicate that the CILY phytoplasma may have a westward spread to other coconut-growing areas of Grand-Lahou. CILY phytoplasma strains infecting coconut palms in the western region of Grand-Lahou exhibited unique single nucleotide polymorphisms on the rp sequence compared to the strains from the eastern region. Moreover, single nucleotide polymorphisms on the SecA sequence distinguished the CILY phytoplasma from the Cape St. Paul Wilt Disease phytoplasma in Ghana, and the Lethal Yellowing phytoplasma in Mozambique. (Résumé d'auteur

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