Two Klebsiella bacteriophages K5-2 and K5-4, which are able to infect and grow on either capsular types K30/K69 and K5 or K8 and K5 of Klebsiella strains, were isolated and characterized. Each phage contained two open reading frames (ORFs), which encoded two putative capsule depolymerases, respectively. The first ORF encoded tail fiber proteins, which have K30/K69 depolymerase and K8 depolymerase activities. The second ORF encoded hypothetical proteins, which are almost identical in amino acid sequences, and have K5 depolymerase activity. Alcian blue staining of enzyme-treated capsular polysaccharides (CPS) showed that purified depolymerases can cleave purified Klebsiella CPS in vitro and liberate monosaccharaides. Capsule K5 deletion mutants were not lysed by either phage, suggesting that the capsule was essential for phage infection. Bacterial killing was observed when incubated Klebsiella strains with phages but not with purified depolymerases. Treatment with the K5-4 phage significantly increased the survival of mice infected with a K. pneumoniae K5 strain. In conclusion, two dual host-specific Klebsiella phages and their tailspikes exhibit capsule depolymerase activity were characterized. Each phage and phage-encoded depolymerase has specificity for capsular type K30/K69, K8 or K5, and could be used for the typing and treatment of K. pneumoniae infection.
Background
Physical distancing and facemask use are worldwide recognized as effective non‐pharmaceutical interventions (NPIs) against the coronavirus disease‐2019 (COVID‐19). Since January 2020, Taiwan has introduced both NPIs but their effectiveness on non‐COVID‐19 respiratory viruses (NCRVs) remain underexplored.
Methods
This retrospective observational study examined electronic records at a tertiary hospital in northern Taiwan from pre‐COVID (January–December 2019) to post‐COVID period (January–May 2020). Patients with respiratory syndromes were tested for both enveloped (eg, influenza virus and seasonal coronavirus) and non‐enveloped RVs (eg, enterovirus and rhinovirus) using multiplex reverse transcription polymerase chain reaction assays. Monthly positivity rates of NCRVs among adult and pediatric patients were analyzed with comparison between pre‐ and post‐COVID periods.
Results
A total of 9693 patients underwent 12 127 multiplex RT‐PCR tests. The average positivity rate of NCRVs reduced by 11.2% (25.6% to 14.4%) after nationwide PHIs. Despite the COVID‐19 pandemic, the most commonly identified enveloped and non‐enveloped viruses were influenza virus and enterovirus/rhinovirus, respectively. Observed reduction in NCRV incidence was predominantly contributed by enveloped NCRVs including influenza viruses. We did not observe epidemiological impacts of NPIs on non‐enveloped viruses but an increasing trend in enterovirus/rhinovirus test positivity rate among pediatric patients. Our data were validated using Taiwan's national notification database.
Conclusions
Our frontline investigation suggests that the current NPIs in Taiwan might not effectively control the transmission of non‐enveloped respiratory viruses, despite their protective effects against influenza and seasonal coronavirus. Health authorities may consider using hydrogen peroxide or chloride‐based disinfectants as additional preventative strategies against non‐enveloped respiratory viruses in the post‐COVID‐19 era.
Background Physical distancing and facemask use are worldwide recognized
as effective non-pharmaceutical interventions (NPIs) against the
coronavirus disease 2019 (COVID-19). Since January 2020, Taiwan has
introduced both NPIs but their effectiveness on non-COVID-19 respiratory
viruses (NCRVs) remain underexplored. Methods This retrospective
observational study examined electronic records at a tertiary hospital
in northern Taiwan from pre-COVID (January–December 2019) to post-COVID
period (January–May 2020). Patients with respiratory syndromes were
tested for both enveloped (e.g. influenza virus and seasonal
coronavirus) and non-enveloped RVs (e.g. enterovirus and rhinovirus)
using multiplex reverse-transcription polymerase chain reaction assays.
Monthly positivity rates of NCRVs among adult and pediatric patients
were analyzed with comparison between pre- and post-COVID periods.
Results A total of 9693 patients underwent 12127 multiplex RT-PCR tests.
The average positivity rate of NCRVs reduced by 11.2% (25.6% to
14.4%) after nationwide PHIs. Despite the COVID-19 pandemic, the most
commonly identified enveloped and non-enveloped viruses were influenza
virus and enterovirus/rhinovirus, respectively. Observed reduction in
NCRV incidence was predominantly contributed by enveloped NCRVs
including influenza viruses. We did not observe epidemiological impacts
of NPIs on non-enveloped viruses but an increasing trend in
enterovirus/rhinovirus test positivity rate among pediatric patients.
Our data were validated using Taiwan’s national notification database.
Conclusions Our frontline investigation suggests that the current NPIs
in Taiwan might not effectively control the transmission of
non-enveloped respiratory viruses, despite their protective effects
against influenza and seasonal coronavirus. Hydrogen peroxide or
chloride-based disinfectants should be integrated into national
preventative strategies against respiratory viral infections in the
post-COVID-19 era.
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