In the study, an interface toolbox for image fusion (IFT) is developed and implemented of using the Matlab programming language. MATLAB developed by MathWorks is suitable for rapid application development and also its scope is scripts and functions can be run as m-files in the open source program Octave. In program, the interface toolbox is created to integrate from different types of satellite images to a single enhanced image. This image fusion toolbox is useful at the undergraduate students to understand the results of the image enhancements technique and the integration of remotely sensed images.
Knowledge of the pathogen-host interactions between the species is essentialin order to develop a solution strategy against infectious diseases. In vitro methods take extended periods of time to detect interactions and provide very few of the possible interaction pairs. Hence, modelling interactions between proteins has necessitated the development of computational methods. The main scope of this paper is integrating the known protein interactions between thehost and pathogen organisms to improve the prediction success rate of unknown pathogen-host interactions. Thus, the truepositive rate of the predictions was expected to increase.In order to perform this study extensively, encoding methods and learning algorithms of several proteins were tested. Along with human as the host organism, two different pathogen organisms were used in the experiments. For each combination of protein-encoding and prediction method, both the original prediction algorithms were tested using only pathogen-host interactions and the same methodwas testedagain after integrating the known protein interactions within each organism. The effect of merging the networks of pathogen-host interactions of different species on the prediction performance of state-of-the-art methods was also observed. Successwas measured in terms of Matthews correlation coefficient, precision, recall, F1 score, and accuracy metrics. Empirical results showed that integrating the host and pathogen interactions yields better performance consistently in almost all experiments.
Recently, the number of the amino acid sequences shared in online databases is growing rapidly in huge amounts. By using sequence-derived features, machine learning algorithms are successfully applied to prediction of protein functional classes, protein-protein interactions, subcellular location, and peptides of specific properties in many studies. Protein Sequence Encoding System (PROSES) is a web server designed as freely and easily accessible for all researchers who want to use computational methods on protein sequence data. That is, PROSES provides users to encode their protein sequences easily without writing any programming code.
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