The distribution of the endangered glacial relict subspecies, the Pannonian root vole Alexandromys oeconomus mehelyi Éhik, 1928, is restricted to scattered localities in south-western Slovakia, which belong to the north-eastern zone of its range. Human-induced changes and fragmentation of the landscape have led to the gradual loss of suitable habitats and threaten its long-term survival. The study area in the Danubian Lowland is characterised by small habitat fragments and temporal fluctuations of the habitat area. Root voles were sampled at nine sites to study the level of genetic variability and structure of local subpopulations by scoring 13 microsatellite loci in 69 individuals. Genetic differentiation varied amongst local populations and we did not find a significant isolation-by-distance pattern. Bayesian clustering analysis suggested that dispersal effectively prevents marked genetic subdivision between studied habitat fragments. Significant pairwise differentiation between some subpopulations, however, may be the result of putatively suppressed gene flow. Low genetic diversity in the recent populations probably reflects the isolated location of the study area in the agricultural landscape, suggesting that long-term survival may not be assured. In order to maintain genetic diversity, it is essential to preserve (or even restore) habitats and ensure the possibility of gene flow; habitat protection is, therefore, recommended. Continuous assessment is necessary for effective conservation management and to predict the long-term survival chances of the Pannonian root vole in the study area.

The Pannonian root vole Alexandromys oeconomus ssp. mehelyi represents a rare glacial relict, whose occurrence is nowadays bound to several areas in Europe. Four somatic and 25 craniological features were analysed, based on 355 measured specimens. Sex is a significant factor affecting the average value of all four somatic features, where all of them achieve higher values in males than in females. While body length and tail length were also affected by seasons, body weight and the length of the hind foot were stable features present across the seasons. In cranial features, the largest variability in the adult population is characterised by neurocranium breadth (LaN), total length of the cranial base (LB), and skull (LCr); whereas the smallest variability of the cranial dimensions is reflected in the values of the greatest palatal breadth (PS) and postorbital breadth (Io). Calculating the weight from cranial remains may be used to estimate the size of the prey and to determine vole biomass consumed by predators, such as raptors, highlighting the utility of studying feeding ecology.