IntroductionCytogenetic analysis is important for stratifying patients with various neoplasms. We explored the use of targeted next generation sequencing (NGS) in detecting chromosomal structural abnormalities or copy number variations (CNVs) in patients with myeloid neoplasms.MethodsPlasma cell-free DNA (cfDNA) from 2821 myeloid or lymphoid neoplasm patients were collected. cfDNA was sequenced using a 275 gene panel. CNVkit software was used for analyzing and visualizing CNVs. Cytogenetic data from corresponding bone marrow (BM) samples was available on 89 myeloid samples.ResultsOf the 2821 samples, 1539 (54.5%) showed evidence of mutations consistent with the presence of neoplastic clones in circulation. Of these 1539 samples, 906 (59%) showed abnormalities associated with myeloid neoplasms and 633 (41%) with lymphoid neoplasms. Chromosomal structural abnormalities in cfDNA were detected in 146 (16%) myeloid samples and 76 (12%) lymphoid samples. Upon comparison of the myeloid samples with 89 BM patients, NGS testing was able to reliably detect chromosomal gain or loss, except for fusion abnormalities. When cytogenetic abnormalities were classified according to prognostic classes, there was a complete (100%) concordance between cfDNA NGS data and cytogenetic data.ConclusionsThis data shows that liquid biopsy using targeted NGS is reliable in detecting chromosomal structural abnormalities in myeloid neoplasms. In specific circumstances, targeted NGS may be reliable and efficient to provide adequate information without the need for BM biopsy considering broad mutation profiling can be obtained through adequate sequencing within the same test. Overall, this study supports the use of liquid biopsy for early diagnosis and monitoring of patients with myeloid neoplasms.
Introduction: While an association between AI diseases and the development of lymphoma (LYM) is known, the impact of AI diseases on patient (pt) outcome across varying LYM subtypes, including the role of immunosuppressive medications (ISM), is not well understood. Methods: We conducted a large, multicenter, RWE retrospective analysis of adult pts with a diagnosis (dx) of lymphoma (LYM) between 1/2000 and 12/2020 and a pre-existing AI disease (see full list AI in Table 1). We examined baseline clinical features at LYM diagnosis, underlying AI disease characteristics, type/duration of ISM, LYM therapy received and survival outcomes. Multinomial regression models adjusted for age and sex identified associations between LYM subtypes, AI diseases, and ISM exposure, and were reported as relative risk ratio (RRR). Survival rates were estimated by Kaplan-Meier. Univariate associations of baseline factors with survival in cases with non-missing data were examined by Cox model and stratified by International Prognostic Index (IPI). Results: In total, 785 pts were identified across 14 North American institutions, of which 694 pts with complete data were included in the final analysis. Rheumatoid arthritis was the most common AI disease (30%) (Table 1). Diffuse large B-cell lymphoma (DLBCL) was the most common histologic subtype (n=303, 44%), and it was the most prevalent histology for nearly every AI disease. The median duration between AI disease and LYM diagnosis was 108 months (mo) (1-816 mo). Several associations were found between specific AI diseases and LYM subtypes, including: Hashimoto's thyroiditis with marginal zone lymphoma (MZL, RRR 2.78 (95% CI 1.14-6.78, P=0.024), Waldenstrom's macroglobulinemia (RRR 7.12 (95% CI 1.07-47.3, P=0.031), and follicular lymphoma (RRR, 2.71, 95% CI 1.01-7.24, P=0.047); Polymyalgia rheumatica with CLL/SLL (RRR 21.27 (95% CI 4.57-98.96), P=0.0001) and MZL (RRR 6.62 (95% CI 1.38-31.80), P=0.018); Psoriasis with peripheral T-cell lymphoma (PTCL, RRR 3.85 (95% CI 1.21-12.22), P=0.022); and Inflammatory bowel disease with CLL/SLL (HR 4.60 (95% CI 1.72-12.34), P=0.002). Overall, 402 (58%) pts had ISM exposure prior to LYM dx, with 279 (40%) pts on active ISM at time of LYM dx. The most commonly used ISM agent was methotrexate (26%); the median duration of ISM prior to LYM diagnosis was 60 mo (1-480). Compared with DLBCL pts, those diagnosed with PTCLs were more likely to have had exposure to TNF-α inhibitors (RR 1.89, 95% CI 1.23-2.89, P=0.004) or apremilast, a phosphodiesterase-4 inhibitor (RR 19.2, 95% CI 2.6-149.9, P=0.005). Rituximab +/- chemotherapy was used as frontline therapy in the majority of B-cell LYM pts, including 90% of DLBCL. Of LYM pts on ISM at initial dx, 41% had a reduction in immunosuppression (RIS), of whom 81% stopped ISM completely (Table 1). Only 10% of pts who underwent RIS were reported to have a flare of AI disease during initial therapy, compared with 7% of pts who had a flare despite no RIS (P=NS). Survival by histology is depicted in Figure A/B. For DLBCL pts (n=303), survival appeared overall comparable to historically reported outcomes in the general DLBCL population. Neither antecedent use of ISM nor duration of ISM were associated with pt outcomes (data not shown). However, a survival advantage was identified among DLBCL pts whose ISM was stopped completely during frontline therapy compared with pts who were not on ISM at diagnosis (Figure C/D). In addition, 10 DLBCL pts underwent 100% RIS +/- rituximab with therapeutic intent and did not receive cytotoxic chemotherapy as part of frontline therapy. Among these, 4 pts (mean age 62 years (26-84); ISM: n=2 MTX, and 1 each azathioprine and etanercept/MTX; EBV+ 2/4) achieved complete remission and remain disease-free at time of last follow-up at 5, 74, 105, and 221 months post-DLBCL dx. Conclusions: Altogether, we identified several novel histologic associations of AI diseases with LYM histologic subtypes. Furthermore, prior receipt of TNF-α inhibitor or a phosphoediesterase 4 inhibitor were associated with a diagnosis of PTCL. For DLBCL pts with antecedent AI disease, complete cessation of ISM during frontline LYM therapy appeared to be associated with improved survival. Finally, there were a small number of select DLBCL pts who garnered long-term disease-free survival using RIS +/- rituximab as frontline therapy, similar to the treatment paradigm in post-transplant lymphoproliferative disorders. Figure 1 Figure 1. Disclosures Olszewski: TG Therapeutics: Research Funding; PrecisionBio: Research Funding; Celldex Therapeutics: Research Funding; Acrotech Pharma: Research Funding; Genentech, Inc.: Research Funding; Genmab: Research Funding. Feldman: Alexion, AstraZeneca Rare Disease: Honoraria, Other: Study investigator. Karmali: Karyopharm: Consultancy; Epizyme: Consultancy; Morphosys: Consultancy, Speakers Bureau; Kite, a Gilead Company: Consultancy, Research Funding, Speakers Bureau; Genentech: Consultancy; AstraZeneca: Speakers Bureau; BeiGene: Consultancy, Speakers Bureau; BMS/Celgene/Juno: Consultancy, Research Funding; EUSA: Consultancy; Janssen/Pharmacyclics: Consultancy; Roche: Consultancy; Takeda: Research Funding. Lunning: TG Therapeutics: Consultancy; Janssen: Consultancy; Verastem: Consultancy; Spectrum: Consultancy; Myeloid Therapeutics: Consultancy; AstraZeneca: Consultancy; Morphosys: Consultancy; ADC Therapeutics: Consultancy; Beigene: Consultancy; Daiichi-Sankyo: Consultancy; Kyowa Kirin: Consultancy; Celgene, a Bristol Myers Squibb Co.: Consultancy; Legend: Consultancy; Acrotech: Consultancy; Novartis: Consultancy; Kite, a Gilead Company: Consultancy; Karyopharm: Consultancy; AbbVie: Consultancy. Palmisiano: Genentech: Research Funding; AbbVie: Consultancy, Research Funding; Takeda: Consultancy; Foundation One: Consultancy. Danilov: Bristol-Meyers-Squibb: Honoraria, Research Funding; Gilead Sciences: Research Funding; Pharmacyclics: Consultancy, Honoraria; Beigene: Consultancy, Honoraria; Abbvie: Consultancy, Honoraria; TG Therapeutics: Consultancy, Research Funding; Takeda Oncology: Research Funding; Genentech: Consultancy, Honoraria, Research Funding; Bayer Oncology: Consultancy, Honoraria, Research Funding; Astra Zeneca: Consultancy, Honoraria, Research Funding; SecuraBio: Research Funding; Rigel Pharm: Honoraria. Barta: Kyowa Kirin: Honoraria; Acrotech: Honoraria; Daiichi Sankyo: Honoraria; Seagen: Honoraria. Lansigan: Celgene/BMS: Consultancy, Membership on an entity's Board of Directors or advisory committees. Savage: Astra-Zeneca: Consultancy, Honoraria; Takeda: Other: Institutional clinical trial funding; Roche: Research Funding; Merck: Consultancy, Honoraria, Other: Institutional clinical trial funding; BMS: Consultancy, Honoraria, Other: Institutional clinical trial funding; Seattle Genetics: Consultancy, Honoraria; Servier: Consultancy, Honoraria; AbbVie: Consultancy, Honoraria; Beigene: Other: Institutional clinical trial funding; Genentech: Research Funding.
The novel COVID-19 virus has been found to be associated in a wide variety of complications most commonly involving the lungs namely by pneumonia with resultant ARDS. We present a case of COVID19 related extensive pulmonary emboli. CASE PRESENTATION: A previously well 47-year-old male presented with an 8 day history of fever, cough & dyspnea. He tested positive for COVID-19 as an outpatient. Four days later, he developed left sided pleuritic chest pain & presented to hospital. On examination, blood pressure was 119/89mmHg, HR 124beats/min & RR 44breaths/min. Despite this, he was saturating 93% on room air. On examination, he had diminished breath sounds and faint crackles bilaterally. Significant laboratory investigations revealed, leucocytosis of 18 (4.00-11.00 K/ul), troponin of 3.13 (0.00-0.03ng/ml), C-reactive protein was 236 (<10mg/l) , Ddimer was >20 UG/ml FEU (0.00-0.04 ug/ml) and BNP of < 5 (0-100pg/ml). Electrocardiogram revealed sinus tachycardia with no ST segment changes. Plain chest radiograph had subsegmental airspace disease in the left lower lobe. CT pulmonary angiography revealed a saddle pulmonary embolus with filling defects throughout right upper middle and lower lobe and left upper and lower lobe pulmonary arteries, and evidence of right heart strain. There were airspace opacities in the left and right lungs. A transthoracic echocardiogram study confirmed right heart strain. He underwent emergent catheter directed thrombolysis and was placed on heparin infusion. Two days later, an IVC filter was placed. He was discharged on day 7 with a six month course apixaban. He received five days of hydroxychloroquine, thiamine, vitamin C and zinc. He was also given 5 days of ceftriaxone. At 2 month follow up, he continues to do well and no longer has any respiratory symptoms or further hypoxia
INTRODUCTION: Diagnosis and treatment of PAH can be quite difficult especially when the differentials include chronic thromboembolic pulmonary hypertension (CTEPH) and pulmonary veno-occlusive disease (PVOD). We present a case of CTEPH diagnosed on lung biopsy followed by pulmonary endarterectomy (PEA).
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