We introduce an approximation for the pair distribution function of the inhomogeneous hard sphere fluid. Our approximation makes use of our recently published averaged pair distribution function at contact, which has been shown to accurately reproduce the averaged pair distribution function at contact for inhomogeneous density distributions. This approach achieves greater computational efficiency than previous approaches by enabling the use of exclusively fixed-kernel convolutions and thus allowing an implementation using fast Fourier transforms. We compare results for our pair distribution approximation with two previously published works and Monte Carlo simulation, showing favorable results.
We present a modification to our recently published statistical associating fluid theory-based classical density functional theory for water. We have recently developed and tested a functional for the averaged radial distribution function at contact of the hard-sphere fluid that is dramatically more accurate at interfaces than earlier approximations. We now incorporate this improved functional into the association term of our free energy functional for water, improving its description of hydrogen bonding. We examine the effect of this improvement by studying two hard solutes (a hard hydrophobic rod and a hard sphere) and a Lennard-Jones approximation of a krypton atom solute. The improved functional leads to a moderate change in the density profile and a large decrease in the number of hydrogen bonds broken in the vicinity of the hard solutes. We find an improvement of the partial radial distribution for a krypton atom in water when compared with experiment.
We investigate the value of the correlation function of an inhomogeneous hard-sphere fluid at contact. This quantity plays a critical role in statistical associating fluid theory, which is the basis of a number of recently developed classical density functionals. We define two averaged values for the correlation function at contact and derive formulas for each of them from the White Bear version of the fundamental measure theory functional, using an assumption of thermodynamic consistency. We test these formulas, as well as two existing formulas, against Monte Carlo simulations and find excellent agreement between the Monte Carlo data and one of our averaged correlation functions.
Soil salinity has emerged as one of the most serious and widespread consequences of the climatic wet period affecting the northern region of the American Midwest since 1993. Groundwater levels have increased, causing not only millions of hectares of prevented planting in the Dakotas, but also much higher levels of soil salinity on otherwise productive soils. A persistent comment from producers throughout eastern North Dakota during the wet cycle was that salinity had emerged in areas where it was never a problem before. Management techniques to reduce salinity effects include crop selection, use of cover crops after harvest, calcium chemical amendments for sodic soils, tillage changes to reduce upland recharge, and tile drainage to lower water tables. Soil data collected to establish background salinity and sodicity levels on a Nahon soil map unit (fine, smectitic, frigid Calcic Natrudolls) east of Wheatland, ND are presented with a broader interpretation regarding the need to perform soil chemical sampling for certain soils before installing tile drainage.
The dynamics of the Min-protein system help Escherichia coli regulate the process of cell division by identifying the center of the cell. While this system exhibits robust bipolar oscillations in wild-type cell shapes, recent experiments have shown that when the cells are mechanically deformed into wide, flattened out, irregular shapes, the spatial regularity of these oscillations breaks down. We employ widely used stochastic and deterministic models of the Min system to simulate cells with flattened shapes. The deterministic model predicts strong bipolar oscillations, in contradiction with the experimentally observed behavior, while the stochastic model, which is based on the same reaction-diffusion equations, predicts more spatially irregular oscillations. We further report simulations of flattened but more symmetric shapes, which suggest that the flattening and lateral expansion may contribute as much to the irregular oscillation behavior as the asymmetry of the cell shapes.
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