The photochemical behavior of doxazosin (DOX) in simulated environmental conditions using natural waters taken from local rivers as a solvent was studied. The chemical characteristics of applied waters was done and a correlation analysis was used to explain the impact of individual parameters of matrix on the rate of the DOX degradation. It was stated that DOX is a photoliable compound in an aqueous environment. Its degradation is promoted by basic medium, presence of environmentally important ions such as Cl−, NO3−, SO42− and organic matter. The kinetics of DOX reactions with OH− and SO4− radicals were examined individually. The UV/H2O2, classical Fenton and photo-Fenton processes, were applied for the generation of hydroxyl radicals while the UV/VIS:Fe2(SO4)3:Na2SO2 system was employed for production of SO4− radicals. The obtained results pointed that photo-Fenton, as well as UV/VIS:Fe2(SO4)3:Na2SO2, are very reactive in ratio to DOX, leading to its complete degradation in a short time. A quantitative density functional theory (DFT) mechanistic study was carried out in order to explain the molecular mechanism of DOX degradation using the GAUSSIAN 09 program.