The Human BioMolecular Atlas Program (HuBMAP) aims to create a multi-scale spatial atlas of the healthy human body at single-cell resolution by applying advanced technologies and disseminating resources to the community. As the HuBMAP moves past its first phase, creating ontologies, protocols and pipelines, this Perspective introduces the production phase: the generation of reference spatial maps of functional tissue units across many organs from diverse populations and the creation of mapping tools and infrastructure to advance biomedical research.HuBMAP was founded with the goal of establishing state-of-the-art frameworks for building spatial multiomic maps of non-diseased human organs at single-cell resolution 1 . During the first phase (2018)(2019)(2020)(2021)(2022), the priorities of the project included the validation and development of assay platforms; workflows for data processing, management, exploration and visualization; and the establishment of protocols, quality control standards and standard operating procedures. Extensive infrastructure was established through a coordinated effort among the various HuB-MAP integration, visualization and engagement teams, tissue-mapping centres, technology and tools development and rapid technology implementation teams and working groups 1 . Single-cell maps, predominantly consisting of two-dimensional (2D) spatial data as well as data from dissociated cells, were generated for several organs. The HuBMAP Data Portal (https://portal.hubmapconsortium.org) was established for open access to experimental tissue data and reference atlas data.The infrastructure was augmented with software tools for tissue data registration, processing, annotation, visualization, cell segmentation and automated annotation of cell types and cellular neighbourhoods from spatial data. Computational methods were developed for integrating multiple data types across scales and interpretation 2 . Standard reference terminology and a common coordinate framework spanning anatomical to biomolecular scales were established to ensure interoperability across organs, research groups and consortia 3 . Guidelines to capture high-quality multiplexed spatial data 4 were established including validated panels of cell-and structure-specific antibodies 5 . The first phase produced a large number of manuscripts (https://commonfund.nih.gov/ publications?pid=43) including spatially resolved single-cell maps [6][7][8][9][10][11] .The production phase of HuBMAP was launched in the autumn of 2022. The focus is on scaling data production spanning diverse biological variables (for example, age and ethnicity) and deployment and enhancement of analytical, visualization and navigational tools to generate high-resolution 3D accessible maps of major functional tissue units from more than 20 organs. This phase involves over 60 institutions and 400 researchers with opportunities for active intra-and inter-consortia collaborations and building a foundational resource for new biological insights and precision medicine. Below, ...
The resiliency of librarians is tested once again with the devastating occurrence of the pandemic situation worldwide. As a result of the global scare, many libraries have shut down as prescribed by the governments to minimize physical contact and stop the spread of viruses. Yet, libraries live up to their mandate of serving the information needs of their patrons. This report documents the role of libraries in Kazakhstan during the pandemic and how libraries responded quickly to avoid disruption of programs and services. This document also describes some of the “new normal” initiatives and strategies libraries have adapted to respond to the needs of their clients. On the other hand, librarians are stepping up and making enormous efforts to manage their call of duty to provide and distribute factual and reliable information to all their stakeholders. Adapting to a change of working environment also needs to be looked into. Since the start of work from home in mid-March 2020, was there a change of lifestyle? What factors affect their work productivity? An online interview of select English library staff speakers will be conducted.
Purpose Oral histories (OHs), as primary sources of information, are used as evidences of the past and inculcate human memory. It is a real testimony of our history. However, OHs are now neglected and somehow unpopular. Strategies must be done to make sure that OH projects should continue to be used as proofs. The purpose of this paper is to go back in time and review the OH in Asia, in the Philippines, and the collection at De La Salle University. Design/methodology/approach This study explores the OH collection of the DLSU Archives. Data are extracted from the Sierra library system. Extracted subjects are arranged alphabetically. They are presented and summarized below. Historical data coming from the correspondences kept at the archives are also used to understand how the collection accumulated and how they are being organized, classified, and used by the patrons. Literature reviews are also consulted to learn more about the background of OH in the Philippines. Findings A total of 176 subjects are identified. These subjects are selected on the basis of the Library of Congress Classification Scheme which is re-categorized according to the Philippine Standard Industrial Classification to identify which type of industry does each OH belong to. The category on professional, scientific and technical activities had 30 LCC-related subjects or 16.95 percent of the total number of subjects, next is 15.25 percent or 27 LCC-related subjects which comes from the arts, entertainment and recreation, and top three is Public Administration and Defense; Compulsory Security with 10.23 percent. Research limitations/implications This paper shares the challenges and experiences of establishing and maintaining OHs. Practical implications The paper presents new ways or initiatives to capture OH other than the traditional and usual process. Social implications Oral interviews are given proper attention as part of the local history. Originality/value There is a scarcity of OH papers written by librarians; therefore, this paper presents the current status of OH in the country.
Purpose – The concept of academic library consortium emerged in the Philippines in the 1970s evidenced by the successive establishment of three consortia namely, the Academic Libraries Book Acquisition Services Association (ALBASA) in 1973, the Inter-Institutional Consortium (IIC) (now South Manila Inter-Institutional Consortium) in 1974, and the Mendiola Consortium (MC) in 1975. This paper aims to find out the experiences and status of selected academic library consortia in the Philippines, namely, the Academic Libraries Book Acquisitions Systems Association, Inc. (ALBASA), the American Corners (also known as American Studies Resource Center (ASRC) in some areas), the Aurora Boulevard Consortium Libraries, Inc. (ABC), the Davao Colleges and University Network (DACUN), the Inter University Consortium (IUC), the Intramuros Library Consortium (ILC), the Mendiola Consortium (MC), the Ortigas Center Library Consortium (OCLC), and the South Manila Inter institutional Consortium (SMI-IC) specifically in terms of the objectives of the different consortia, the activities they undertake and how such relate to the set objectives, the benefits they have enjoyed or continue to enjoy, the issues they have encountered as well as success/failure factors experienced by libraries in joining the different consortia. Design/methodology/approach – The sample was derived from the review of literature, which also served as basis to come up with the list of existing academic library consortia. The respondents were selected based on the Philippine Association of Academic and Research Librarians (PAARL) directory. Communication was sent via email, telephone, scheduled personal interview and social networking sites (e.g. Facebook). A total of 13 out of 23 (56.52 percent) respondents accomplished the survey questionnaires which were distributed online and manually. Descriptive statistics was used to analyze the results. Findings – Results of the study revealed that the role academic library consortia play in the development of academic libraries is crucial particularly in the promotion of professional development and resource sharing. As technology greatly influences the way libraries do things, the varying level of technological development among consortium member libraries confirmed to be a major challenge being faced by them today. While majority of the surveyed consortia assessed themselves to be successful, it is evident that there is lack of congruence between the consortia's objectives and undertakings. Originality/value – The paper is a modest contribution to the dearth of literature in Philippine academic library consortia. It also is the first study conducted measuring the success of selected academic consortia and identifying the factors contributing to their success/failure.
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