We present a historical overview of forest concepts and definitions, linking these changes with distinct perspectives and management objectives. Policies dealing with a broad range of forest issues are often based on definitions created for the purpose of assessing global forest stocks, which do not distinguish between natural and planted forests or reforests, and which have not proved useful in assessing national and global rates of forest regrowth and restoration. Implementing and monitoring forest and landscape restoration requires additional approaches to defining and assessing forests that reveal the qualities and trajectories of forest patches in a spatially and temporally dynamic landscape matrix. New technologies and participatory assessment of forest states and trajectories offer the potential to operationalize such definitions. Purpose-built and contextualized definitions are needed to support policies that successfully protect, sustain, and regrow forests at national and global scales. We provide a framework to illustrate how different management objectives drive the relative importance of different aspects of forest state, dynamics, and landscape context.Electronic supplementary materialThe online version of this article (doi:10.1007/s13280-016-0772-y) contains supplementary material, which is available to authorized users.

TAp63, but not its homolog p53, eliminates oocytes that suffered DNA damage. An equivalent gene for guarding the male germ line is currently not known. Here we identify hitherto unknown human p63 transcripts with unique 5′-ends derived from incorporated exons upstream of the currently mapped TP63 gene. These unique p63 transcripts are highly and specifically expressed in testis. Their most upstream region corresponds to a LTR of the human endogenous retrovirus 9 (ERV9). The insertion of this LTR upstream of the TP63 locus occurred only recently in evolution and is unique to humans and great apes (Hominidae). A corresponding p63 protein is the sole p63 species in healthy human testis, and is strongly expressed in spermatogenic precursors but not in mature spermatozoa. In response to DNA damage, this human male germ-cellencoded TAp63 protein (designated GTAp63) is activated by caspase cleavage near its carboxyterminal domain and induces apoptosis. Human testicular cancer tissues and cell lines largely lost p63 expression. However, pharmacological inhibition of histone deacetylases completely restores p63 expression in testicular cancer cells (>3,000-fold increase). Our data support a model whereby testis-specific GTAp63 protects the genomic integrity of the male germ line and acts as a tumor suppressor. In Hominidae, this guardian function was greatly enhanced by integration of an endogenous retrovirus upstream of the TP63 locus that occurred 15 million years ago. By providing increased germ-line stability, this event may have contributed to the evolution of hominids and enabled their long reproductive periods.spermatogonia | genomic surveillance | primate evolution | seminoma | suberoylanilide hydroxamic acid

Mapping anthropogenic forest disturbances has largely been focused on distinct delineations of events of deforestation using optical satellite images. In the tropics, frequent cloud cover and the challenge of quantifying forest degradation remain problematic. In this study, we detect processes of deforestation, forest degradation and successional dynamics, using long-wavelength radar (L-band from ALOS PALSAR) backscatter. We present a detection algorithm that allows for repeated disturbances on the same land, and identifies areas with slow-and fast-recovering changes in backscatter in close spatial and temporal proximity. In the study area in Madre de Dios, Peru, 2.3% of land was found to be disturbed over three years, with a false positive rate of 0.3% of area. A low, but significant, detection rate of degradation from sparse and small-scale selective logging was achieved. Disturbances were most common along the tri-national Interoceanic Highway, as well as in mining areas and areas under no land use allocation. A continuous spatial gradient of disturbance was observed, highlighting artefacts arising from imposing discrete boundaries on deforestation events. The magnitude of initial radar backscatter, and backscatter decrease, suggested that large-scale deforestation was likely in areas with initially low biomass, either naturally or since already under anthropogenic use. Further, backscatter increases following disturbance suggested that radar can be used to characterize successional disturbance dynamics, such as biomass accumulation in lands post-abandonment. The presented radar-based detection algorithm is spatially and temporally scalable, and can support monitoring degradation and deforestation in tropical rainforests with the use of products from ALOS-2 and the future SAOCOM and BIOMASS missions.

Brazil nut (Bertholletia excelsaBonpl.) extraction serves as an important economic resource in the Madre de Dios region of Peru simultaneously promoting forest conservation, yet, under current management, it cannot compete with other land uses. This study investigated the effects of logging gaps on Brazil nut natural regeneration. A total of 48 paired logging gap-understory sites were visited in Brazil nut concessions in the Tambopata province of Madre de Dios, Peru. At each site, the number of Brazil nut recruits was counted and canopy openness and gap area were measured. Significantly higher levels of recruit density were found in logging gaps than in understory sites. Additionally, recruit density was positively correlated with canopy openness. Further, in experimental plantings in paired gap and understory sites, canopy openness, height, total leaf area, and number were recorded from August 2011 to February 2012. Height, total leaf area, and leaf number were significantly higher for tree-fall gap grown seedlings, lending further evidence to improved recruitment success of Brazil nuts in forest gaps. These results suggest that multiple-use forest management could be considered as an alternative for the sustainable extraction of Brazil nuts but also highlight that further studies are required.