Gold mining uses chemicals that are discharged into rivers without any control when there are no good mining practices, generating environmental and public health problems, especially for downstream inhabitants who use the water for consumption, as is the case in Monterrey township, where the Boque River water is consumed. In this study, we evaluate Boque River water quality analyzing some physicochemical parameters such as pH, heavy metals, Hg, and cyanide; bioassays (Lactuca sativa, Hydra attenuata, and Daphnia magna), mutagenicity (Ames test), and microbiological assays. The results show that some physicochemical parameters exceed permitted concentrations (Hg, Cd, and cyanide). D. magna showed sensitivity and L. sativa showed inhibition and excessive growth in the analyzed water. Mutagenic values were obtained for all of the sample stations. The presence of bacteria and somatic coliphages in the water show a health risk to inhabitants. In conclusion, the presence of Cd, Hg, and cyanide in the waters for domestic consumption was evidenced in concentrations that can affect the environment and the health of the Monterrey inhabitants. The mutagenic index indicates the possibility of mutations in the population that consumes this type of water. Bioassays stand out as an alert system when concentrations of chemical contaminants cannot be analytically detected.

Andean blackberry (Rubus glaucus Benth.) is an important crop of the Andean region affected by Colletotrichum gloeosporioides. In Colombia, tolerant plant material has been detected, but it has not been completely characterized. The objective of this research was oriented to analyze de novo transcriptome assembly of R. glaucus, and the comparison of the assembly with different reference genomes to further complete differential expression analysis of R. glaucus tolerant to C. gloespoiorides attack. To achieve this, three groups were used: infected tolerant material, infected susceptible material, and a susceptible group without inoculation. The RNA-seq sequencing was achieved through Illumina Hi-seq 2000. De novo assembly (Trinity, CD-HIT, TopHat) and functional annotation of sequences were carried out, additionally, mapping with reference genomes belonging to Rosaceae families was conducted (Bowtie2, TopHat). Subsequently, the differential expression was quantified (Cuffdiff) and analyzed through EdgeR. Variant analysis was made using MISA and SAMtools. After editing and assembly, 43579 consensus sequences were obtained (N50 = 489 bp; GC = 44.6%), annotation detected 35824 and 35602 sequences in Nt (partially non-redundant nucleotide sequences) and Nr (non-redundant protein sequences) databases, respectively. The 85% of Nr sequences was linked to members of Rosaceae family, mainly strawberry (67.6%). A total of 3570 simple sequence repeat (SSR) markers and 38791 single nucleotide polymorphisms (SNP) were found. The transcriptome of tolerant plants exhibited less SNPs. Finally, differentially expressed genes were found, including RPM1, MAPKBP1, CKX2. This research represents a contribution for future understanding of R. glaucus transcriptome, since there is little information available, and it would help further tolerance-related analysis.

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