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The irregularities of nickel resource mining in Indonesia cause many serious environmental problems. Piles of leftover rocks on nickel mining waste dumps have the potential to be a source of heavy metal seepage into the water. This study was conducted to assess the impact of nickel mining in the Langgikima Subdistrict of the North Konawe Regency of Southeast Sulawesi Province. The focus is to assess the migration of hexavalent chromium (Cr6+) and iron (Fe) using MT3DMS to model the transport of solutes. The study's goal was to identify cr6+ and Fe concentrations in waste dumps and predict the spread of contaminants over a 20-year period of time. XRF (X-Ray Fluorescence) is done to determine the content of elements and minerals in rocks. Toxicity Characteristics Leaching Procedure (TCLP) is performed to estimate the concentration of Cr6+ and Fe in waste dumps. AAS (Atomic Absorption Spectrophotometer) to find out the content of Cr6+ and Fe in surface water and land water samples. The results showed the highest concentrations of Cr6+ of 0.0462 mg/L and Feat 0.8709 mg/L. Simulations without compacted clay coatings, Cr6+ and Fe contaminants could be transported consecutively by 2.7 km and 2.42 km while simulations used compacted clay layers with a hydraulic conductivity of 1 × 10−9 m/s of Cr6+ and Fe contaminants could be transported consecutively by 0.412 km and 0.467 km. It can therefore be concluded that heavy metals in the remaining rock piles from the waste dump can be transported into groundwater, and the action of using a compacted layer of clay must be taken to prevent contaminant migration into groundwater.