Allelopathy is the inhibitory or stimulatory effect of a plant (donor) on other plants (receivers) through the chemicals released from the donor plant to the environment, mostly into the soil. These chemicals may reach the receiver plants in various ways, including leaching from plant foliage, exudation from the roots, and decomposition of dead residue of the donor plants. However, allelopathy in soil is a complicated phenomenon that is affected by soil condition, growth condition of the donor and receiver plants and climatic condition. Allelochemicals in soil are adsorbed on soil solids, and metabolized by chemical and biological reactions during the movement in soil. This behavior is affected by various soil factors, such as soil texture, organic and inorganic matter, moisture and organisms, which affect the phytotoxic activity in soil. If an allelochemical can directly affect the growth of receiver plants in soil, then the allelochemical might be present in the soil water so that it is directly available for absorption by the plant. Thus, it is suggested the concentration of an allelochemical in soil water is a dominant factor directly determining the phytotoxic activity in soil, and the concentration is controlled by soil factors that affect the behavior of adsorption, desorption and degradation in soil.

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2-Aminopyridine (PA)-derivatized oligosaccharides from IgG were analyzed by using reversed-phase HPLC/mass spectrometry (RP-HPLC/MS) and a MS(n) spectral library, in particular, focusing on two pairs of isomers incompletely separated or coeluted in chromatograms. We previously reported that MS(n) spectral matching considering both major fragment ions (m/z) and intensities is useful and applicable to the structural assignment of PA-oligosaccharide isomers. In this study, MS(n) spectral matching based on the MS(n) spectral library was applied to the assignment of these PA-oligosaccharide isomers in IgG. Its usefulness was investigated by comparing it to the conventional two-dimensional mapping method based on retention time indexes. Specifically, we focus on the assignment and quantification of the isomers, which are coeluted in chromatograms. From this, we propose a new method using MS(n) spectral matching and the working curve on which are plotted the relative intensities of selected fragment ions in their MS(2) spectra versus various mixtures of the isomers. This new method demonstrated that the obtained quantities coincide very well with those estimated after separating by a combination of lectin and reversed-phase columns. This means that separation by RP-HPLC/MS is greatly simplified because complete separation of the isomers is no longer required. Application of this new method was tested by using the two other pairs of fucosylated and nonfucosylated PA-oligosaccharides from IgG. The results showed that this method works for them as well.

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