Effective conservation of globally distributed marine species relies on identification of demographically independent populations to ensure that management actions are directed at the appropriate scale. This identification is particularly challenging for species with complex life histories when local breeding populations have not been adequately sampled. We used mtDNA to analyze the population structure of loggerhead turtles from a total of 555 samples collected from 12 nesting sites in Japan in the Northwest Pacific, including previously unsampled rookeries in the Ryukyu Archipelago, for a comprehensive coverage of the nesting distribution. We identified a total of 9 haplotypes based on 820 bp of the mtDNA control region, including 5 variants of a single previously described 380 bp haplotype. We discovered that 1 haplotype (CcP1.1) previously rare in the North Pacific is common in the Ryukyu Archipelago. Based on analysis of haplotype frequencies, we found significant differentiation among regionally grouped nesting populations (analysis of molecular variance p < 0.0001, df = 8; pairwise F ST ranging from 0.033 to 0.145). Our results provide evidence to support the recognition of 3 management units (MU) within the NW Pacific Regional Management Unit (RMU). These include (1) the Ryukyu MU that includes Okinawa, Okinoerabu and Amami, (2) Yakushima Island MU and (3) a Mainland MU that includes Bousou, Enshu-nada, Shikoku, Kii and Eastern Kyushu. These new data from Japan will provide important baseline data for global genetic stock assessments and contribute to our understanding of the population structure, ecology and life history of this migratory marine species in the northern Pacific.
Chronic outbreaks of the coral eating crown-of-thorns starfish (Acanthaster planci) have devastated coral communities throughout the Ryukyu Islands in the past four decades. Since A. planci has high fecundity and long larval duration, knowledge of reproductive timing and larval dispersal are keys to understanding mechanisms of successive recruitment and consequent outbreaks of adults. As the first step to acquiring this knowledge, we monitored water temperature and peak spawning periods using gonad observation. A total of 379 A. planci specimens were collected from
To understand the relationship between turbid water and coral damage caused by the heavy rain disaster at the end of October 2010 in Amami-Oshima, Kagoshima Prefecture, Japan, turbid water and coral damage distribution monitoring was attempted using satellite imagery and a diving survey immediately after the disaster. ALOS AVNIR-2 images (spatial resolution: 10 m) on October 6 (before the disaster), October 24, October 30, and October 31 (after the disaster) were obtained as satellite data in 2010. The red-silt deposition index (RSI) map based on the method by Nadaoka and Tamura (1992) was also created. Moreover, a diving survey was conducted via the spot check method on December 18, 2010. As a result, comparison between the high turbidity (RSI) areas estimated using AVNIR-2 data and the coral damage areas judging from the field survey was considered relatively light. It is shown that satellite data such as AVNIR-2 can be a powerful tool to monitor damage distribution of coral reefs after heavy rain.
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