The North American rock pool mosquito, Aedes atropalpus, has reportedly decreased in abundance following the introduction of Ae. japonicus japonicus to the USA, but the specific mechanisms responsible for the reduction remain unclear. Thus, there is a need for field studies to improve our knowledge of natural rock pool systems where both species co-occur. We sampled rock pool invertebrates over a 12-month period along the Chattooga River at a high-elevation site (728 m) near Cashiers, NC, and at a lower-elevation site (361 m) near Clayton, GA. We identified 12 orders of macroinvertebrates representing at least 19 families and 5 mosquito species. Aedes j. japonicus was present year-round at both sites. We observed overwintering Ae. j. japonicus larvae in pools with water temperatures as cold as 3°C and detected apparent winter egg hatching in water below 10°C. Aedes atropalpus was rarely encountered at the high-elevation site but was highly abundant in the summer months at the low-elevation site. Late-stage Ae. j. japonicus larvae inhabited pools in March 2019 when Ae. atropalpus first appeared in the same pools, creating the potential for asymmetrical stage-specific interactions. Our observations provide evidence of overwintering and early hatching of Ae. j. japonicus in the southeastern climate. Further study of the importance of stage-dependent competition and winter egg hatching of diapausing Ae. j. japonicus eggs is warranted.