Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects.We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives. Geosphere-Biosphere Program (IGBP) and DIVERSITAS, the TRY database (TRY-not an acronym, rather a statement of sentiment; https ://www.try-db.org; Kattge et al., 2011) was proposed with the explicit assignment to improve the availability and accessibility of plant trait data for ecology and earth system sciences. The Max Planck Institute for Biogeochemistry (MPI-BGC) offered to host the database and the different groups joined forces for this community-driven program. Two factors were key to the success of TRY: the support and trust of leaders in the field of functional plant ecology submitting large databases and the long-term funding by the Max Planck Society, the MPI-BGC and the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, which has enabled the continuous development of the TRY database.
J. 2003. The distance dependence prediction of the Janzen-Connell hypothesis: a meta-analysis. -Oikos 103: 590-602.The Janzen-Connell hypothesis explains the maintenance of tropical diversity through the interacting effects of parent-centered dispersal patterns and distance-and density-dependent propagule survival. These effects were thought to support regular spacing of species within tropical forest, enhancing diversity. One of the predictions of the hypothesis is that seed and seedling survival should improve with increased parental distance. Although there are many independent tests of this hypothesis for individual species, there are few synthetic studies that have brought these data together to test its validity across species. This paper reports the results of a meta-analysis of the effect of distance on enhancing propagule survival, employing an odds-ratio effect size metric. We found no general support for the distance-dependent prediction of the hypothesis, and conclude that further testing to explore this hypothesis as a diversity-maintaining mechanism is unnecessary. However, we did find that distance from parent slightly reduces survivorship in the temperate zone, as contrasted with the tropics, and we saw stronger evidence in support of the hypothesis for seedlings than for seeds. The phenomenon of enhanced propagule survival with distance from the parent may be important for the population biology of particular species, but it is not a general phenomenon across communities, life history stages or life forms.Thirty years ago, two papers were published that proposed a suite of testable hypotheses about the processes maintaining diversity in tropical forests. At the time, it was thought that within a forest, individuals from each species of tropical tree were more regularly spaced than would be expected by a random process (Black et al.
Our ability to understand and predict the response of ecosystems to a changing environment depends on quantifying vegetation functional diversity. However, representing this diversity at the global scale is challenging. Typically, in Earth system models, characterization of plant diversity has been limited to grouping related species into plant functional types (PFTs), with all trait variation in a PFT collapsed into a single mean value that is applied globally. Using the largest global plant trait database and state of the art Bayesian modeling, we created fine-grained global maps of plant trait distributions that can be applied to Earth system models. Focusing on a set of plant traits closely coupled to photosynthesis and foliar respiration-specific leaf area (SLA) and dry mass-based concentrations of leaf nitrogen (Nm) and phosphorus (Pm), we characterize how traits vary within and among over 50,000 ∼50 × 50-km cells across the entire vegetated land surface. We do this in several ways-without defining the PFT of each grid cell and using 4 or 14 PFTs; each model's predictions are evaluated against out-of-sample data. This endeavor advances prior trait mapping by generating global maps that preserve variability across scales by using modern Bayesian spatial statistical modeling in combination with a database over three times larger than that in previous analyses. Our maps reveal that the most diverse grid cells possess trait variability close to the range of global PFT means.odeling global climate and the carbon cycle with Earth system models (ESMs) requires maps of plant traits that play key roles in leaf-and ecosystem-level metabolic processes (1-4). Multiple traits are critical to both photosynthesis and respiration, foremost leaf nitrogen concentration (Nm ) and specific leaf area (SLA) (5-7). More recently, variation in leaf phosphorus concentration (Pm ) has also been linked to variation in photosynthesis and foliar respiration (7-12). Estimating detailed global geographic patterns of these traits and corresponding trait-environment relationships has been hampered by limited measurements (13), but recent improvements in data coverage (14) allow for greater detail in spatial estimates of these key traits.Previous work has extrapolated trait measurements across continental or larger regions through three methodologies: (i) grouping measurements of individuals into larger categories that share a set of properties [a working definition of plant functional types (PFTs)] (4, 15), (ii) exploiting trait-environment relationships (e.g., leaf Nm and mean annual temperature) (1,(16)(17)(18)(19)(20), or (iii) restricting the analysis to species whose presence has been widely estimated on the ground (21-24). Each of these methods has limitations-for example, trait-environment relationships do not well explain observed trait spatial patterns (1, 25), while species-based approaches limit the scope of extrapolation to only areas with well-measured species abundance. More critically, the first two global methodologies emp...
Two of the major limitations to effective management of coral reef ecosystems are a lack of information on the spatial distribution of marine species and a paucity of data on the interacting environmental variables that drive distributional patterns. Advances in marine remote sensing, together with the novel integration of landscape ecology and advanced niche modelling techniques provide an unprecedented opportunity to reliably model and map marine species distributions across many kilometres of coral reef ecosystems. We developed a multi-scale approach using three-dimensional seafloor morphology and across-shelf location to predict spatial distributions for five common Caribbean fish species. Seascape topography was quantified from high resolution bathymetry at five spatial scales (5–300 m radii) surrounding fish survey sites. Model performance and map accuracy was assessed for two high performing machine-learning algorithms: Boosted Regression Trees (BRT) and Maximum Entropy Species Distribution Modelling (MaxEnt). The three most important predictors were geographical location across the shelf, followed by a measure of topographic complexity. Predictor contribution differed among species, yet rarely changed across spatial scales. BRT provided ‘outstanding’ model predictions (AUC = >0.9) for three of five fish species. MaxEnt provided ‘outstanding’ model predictions for two of five species, with the remaining three models considered ‘excellent’ (AUC = 0.8–0.9). In contrast, MaxEnt spatial predictions were markedly more accurate (92% map accuracy) than BRT (68% map accuracy). We demonstrate that reliable spatial predictions for a range of key fish species can be achieved by modelling the interaction between the geographical location across the shelf and the topographic heterogeneity of seafloor structure. This multi-scale, analytic approach is an important new cost-effective tool to accurately delineate essential fish habitat and support conservation prioritization in marine protected area design, zoning in marine spatial planning, and ecosystem-based fisheries management.
Ecological perturbations can either be necessary for maintaining tropical forest diversity or responsible for its decline, depending on the scale, nature, and frequency of the disturbance. Anthropogenic disturbances such as logging and subsistence agriculture may promote the establishment of nonnative, invasive plant species, potentially affecting forest structure and diversity even long after the perturbation has ceased. We investigated the impacts of logging 50 and 150 years ago on tropical forest vegetation in Madagascar, a ''hotspot'' of biodiversity. Logging was the overriding factor influencing establishment of nonnative plants. Sites once logged never recovered native species diversity because of the dominance and persistence of invasive species.T emporal and spatial scales of disturbance affect forests differently. Disturbances over a range of scales are critical determinants of tropical forest composition, and the disturbance regime of tropical forests can be essential to maintaining native species diversity and community structure (1-4). Changes in disturbance type, frequency, scale, or intensity can also lead to the loss of species (5-10). The effect of selective logging on native tree diversity in tropical forests is a subject of speculation and of great current concern, but very limited data are available to assess its impact. Under some circumstances, logged tropical forests have been shown to contain as many tree species as unlogged forests (11,12). Some disturbances may also facilitate colonization and establishment of invasive, nonnative plants when dominant native trees are removed (13,14). The most critical questions about the establishment of invasive plants are not whether disturbance promotes establishment of nonnatives. Rather, it is essential to determine whether nonnative plant populations persist in tropical forests once established or are replaced by native species over time, and if persistent, whether the nonnative species have a negative impact on native tree diversity and forest community structure. Although the negative consequences of clear-cutting on the loss of biodiversity are well known, little is currently known about the long-term consequences for tropical forest diversity of selective logging and other more limited anthropogenic disturbances. The effects of colonization by nonnative species on native diversity under such conditions have rarely been considered, but may be important.We investigated the effects of limited logging on the presence, persistence, and impact of invasive species on forest composition in Ranomafana National Park in southeastern Madagascar. The forests of Madagascar are considered a global ''hotspot'' of biodiversity, with among the world's highest levels of plant diversity and endemism. However, they are severely threatened by anthropogenic disturbances (15)(16)(17)(18)(19). We compared stands that were clear-cut and abandoned in about 1855, Ϸ150 years before the study, those selectively logged and abandoned in 1947, a stand that was never logged but...
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