Here, novel 12-helices in α,γ-hybrid peptides composed of achiral α-aminoisobutyric acid (Aib) and 4-aminoisocaproic acid (Aic, doubly homologated Aib) monomers in 1:1 alternation are reported. The 12-helices were indicated by solution and crystal structural analyses of tetra- and heptapeptides. Surprisingly, single crystals of the longer nonapeptide displayed two different helix types: the novel 12-helix and an unprecedented 15/17-helix. Quantum chemical calculations on both helix types in a series of continuously lengthened Aib/Aic-hybrid peptides confirm that the 12-helix is more stable than the 15/17-helix in shorter peptides, whereas the 15/17-helix is more stable in longer sequences. Thus, the coexistence of both helix types can be expected within a definite range of sequence lengths. The novel 15/17- and 12-helices in α,γ-hybrid peptides with 5→1 and 4→1 hydrogen-bonding patterns, respectively, can be viewed as backbone-expanded analogues of native α- and 3 -helices.
The impact of geometrically constrained cis α,β-unsaturated γ-amino acids on the folding of α,γ-hybrid peptides was investigated. Structure analysis in single crystals and in solution revealed that the cis carbon-carbon double bonds can be accommodated into the 12-helix without deviation from the overall helical conformation. The helical structures are stabilized by 4→1 hydrogen bonding in a similar manner to the 12-helices of β-peptides and the 310 helices of α-peptides. These results show that functional cis carbon-carbon double bonds can be accommodated into the backbone of helical peptides.
The direct transformation of nonhelical α,γhybrid peptides composed of alternating αand E-vinylogous amino acids into 12-helical structures through a base-mediated α,β → β,γ double-bond migration is reported. The conformations of double-bond-migrated new 12-helices were studied in single crystals and in solution. Instructively, the 12helices reported here were found to be acid labile, and they completely break down into the corresponding amino acid derivatives upon treatment with acids.
Here, we are reporting
a single-step transformation of N-protected α,β-unsaturated
γ-amino amides
into 5,5-disubstituted γ-lactams through a base-mediated new
molecular rearrangement. In contrast to the known N- to C(O) cyclization
of saturated γ-amino acids into corresponding γ-lactams,
the new rearrangement involves the cyclization between N-terminal
Cγ- to C-terminal amide N. The cyclization process
was initiated by the migration of double bond from α,β
→ β,γ position. The enamine–imine tautomerization
of the new β,γ-double bond and subsequent 5-exo-trig cyclization
of terminal amide leads to the formation of N-protected
5,5-disubstituted γ-lactam. The structures of various γ-lactams
obtained from the rearrangement were studied in single crystals. Overall,
the results reported here demonstrate the facile and single-step transformation
of N-protected α,β-unsaturated γ-amino
amides into γ-lactams and provided an excellent opportunity
to construct small-molecule peptidomimetics.
The impact of geometrically constrained cis a,bunsaturated g-amino acids on the folding of a,g-hybrid peptides was investigated. Structure analysis in single crystals and in solution revealed that the cis carbon-carbon double bonds can be accommodated into the 12-helix without deviation from the overall helical conformation. The helical structures are stabilized by 4!1hydrogen bonding in asimilar manner to the 12-helices of b-peptides and the 3 10 helices of apeptides.These results show that functional cis carbon-carbon double bonds can be accommodated into the backbone of helical peptides.
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