Lyotropic liquid crystals (LLCs) have recently been employed as polymerization templates to yield highly ordered nanostructured hydrogels, which have shown promise in biological separations and tissue engineering. To allow greater control of hydrogel structure using LLC templates, this study focuses on the influence of polymerization kinetics and temperature on ultimate polymer morphology and properties. A more in-depth understanding of these phenomena has been obtained through extensive examination of polymer structure with small-angle X-ray scattering (SAXS) and scanning electron microscopy (SEM). The impact of different polymerization rate and temperature regimes on polymer morphology was determined using isotropic, cubic, and hexagonal phases as polymerization templates. Polymer morphology varies dramatically depending on LLC phase template, while within a given phase changes in polymerization time scale and temperature greatly impact polymer structure. SAXS reveals a higher degree of retained liquid crystalline order using rapid polymerization at relatively low temperatures. SEM images demonstrate that rapid polymerization yields polymers with highly ordered network structures and nanoscale morphology. Less ordered, thermodynamically driven polymer features result from relatively slow polymerization. The degree of swelling in aqueous solution increases dramatically in ordered LLC phases relative to bulk polymerization, with lower swelling resulting from faster polymerization. Similarly, higher surface area results from polymerization in LLC media relative to isotropic systems, and surface area increases with increasing polymerization rate.