In the European Union almost 6 Mha of potatoes are grown representing a value of close to €6,000,000,000. Late blight caused by Phytophthora infestans causes annual losses (costs of control and damage) estimated at more than €1,000,000,000. Chemical control is under pressure as late blight becomes increasingly aggressive and there is societal resistance against the use of environmentally unfriendly chemicals. Breeding programmes have not been able to markedly increase the level of resistance of current potato varieties. New scientific approaches may yield genetically modified marker-free potato varieties (either trans-and/or cisgenic, the latter signifying the use of indigenous resistance genes) as improved variants of currently used varieties showing far greater levels of resistance. There are strong scientific investments needed to develop such improved varieties but these varieties will have great economic and environmental impact. Here we present an approach, based on (cisgenic) resistance genes that will enhance the impact. It consists of five themes: the detection of R-genes in the wild potato gene pool and their function related to the various aspects in the infection route and reproduction of the late blight causing pathogen; cloning of natural R-genes and transforming cassettes of single or multiple (cisgenic) R-genes into existing varieties with proven adaptation to improve their value for consumers; selection of true to the wild type and resistant genotypes with similar qualities as the original variety; spatial and temporal resistance management research of late blight of the cisgenic genetically modified (GM) varieties that contain different cassettes of R-genes to avoid breaking of resistance and reduce build- the different nature and possible biological improvement and legislative repercussions of cisgenic GM-crops in comparison with transgenic GM-crops. It is important to realize that the present EU Directive 2001/18/EC on GM crops does not make a difference between trans-and cisgenes. These rules were developed when only transgenic GM plants were around. We present a case arguing for an updating and refinement of these rules in order to place cisgenic GM-crops in another class of GMplants as has been done in the past with (induced) mutation breeding and the use of protoplast fusion between crossable species.
From 2006 through 2015, a research project on Durable Resistance in potato against Phytophthora (DuRPh) was carried out at Wageningen University and Research Centre. Its objective was to develop a proof of principle for durable resistance against late blight by cisgenesis. This public-funded project aimed at stimulating research on genetic modification and public debate on innovative genetic techniques. It was decided to clone and transfer late blight resistance (R) genes of crossable wild potato species (cisgenes) by Agrobacterium tumefaciens-mediated transformation without non-potato genes. A stack of multiple R genes were planned to be inserted into established varieties, thereby creating a dynamic variety in which the composition of the stacks may vary over space and time. Cisgenic plants were selected based on the expression of all inserted R genes and trueness-to-type. Within the project, 13 R genes from wild potato species were genetically mapped and three of them were cloned. Four varieties were transformed with one to three R genes. This was initially done using kanamycin resistance provided by a selectable marker gene of synthetic origin in order to quickly test the performance and stability of the introduced R genes and stacked R gene combinations. Once the functioning thereof was confirmed, marker-free transformations were conducted; thus, true cisgenic events were selected. The results about the different R genes, their chromosomal location, their specificity, the background dependence, the maximum size of a stack, its regeneration time and associated somaclonal variation frequency and its stability were studied. After selection and characterisation in the laboratory, the best cisgenic events were assessed in field trials for late blight resistance. This showed that inserted R genes were capable of turning a susceptible variety into a resistant one. Maximising longevity of the resistance was assured through resistance management research. It was shown that stacking of multiple R genes and monitoring how to deploy these stacks spatially and temporally could reduce fungicide use by over 80%. Communications through media and field demonstrations were manifold to allow public and policymakers to decide if cisgenesis is an acceptable tool to make potato farming more sustainable. Future deployment of the DuRPh strategy will depend largely on its status as a genetically modified crop or its exemption thereof. Worldwide near eradication of late blight would increase global annual potato production by close to 80 million tons, thereby contributing considerably to the needed additional global future food supply.
SummaryWeed control within crop rows is one of the main problems in organic farming. For centuries, different weed removal tools have been used to reduce weeds in the crop rows. Stimulated by the demand from organic farmers, research in several European countries over the last decade has focused on mechanisation using harrowing, torsion finger weeding and weeding with compressed air (Pneumat). Intelligent weeders are now being developed which offer more advanced ways to control weeds, including larger ones and to leave the crop plants unharmed. One of the first commercially available intelligent weeders, the Sarl Radis from France, has a simple crop detection system based on light interception, which guides a hoe in and out of the crop row, around the crop plants. The inclusion of innovative technologies, including advanced sensing and robotics, in combination with new cropping systems, might lead to a breakthrough in physical weed control in row crops leading to significant reductions, or even elimination, of the need for hand weeding.
For implementation of simple yield loss models into threshold-based weed management systems, © ]996 European Weed Research Society a thorough validation is needed over a great diversity of sites. Yield losses by eompetition wsth Sinapis alba L. {white mustard) as a model weed, were studied in 12 experiments in sugar beet (Beta vutgarLs L.) and in 11 experiments in spring wheat (Triiicum aestivunt L.). Mosl data sets were bet ler described by a model based on the relative leaf area of the weed than by a hyperbolic model based on weed deasity. This leaf area mode] accounted lor (part of) the effect of different emerging times of the S. alba. whereas the density modd did not. A parameter that allows the maximum yield loss to be smaller than K)()% was mostly not needed to describe the effects of weed competition. The parameter that denotes the competitiveness of the weed species wiih respect to the crop decreased the later the relative leaf area of the rnustard was determined. This decrease could be estimated from the differences in relative growth rate of the leaf area of crop and..?. atba. However, the accuracy of this estimation was poor. The parameter value of the leaf area model varied considerably between sites and years. The results strongly suggest that the predictive ability ofthe !eaf area mode! needs to be improved before ii can he applied in weed management systems. Such improvement would require additional information about effects ot abiotic factors on piant development and morphology and ihe definition of a lime window for predictions with an acceptable level of error.
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