Perennial grains hold promise, especially for marginal landscapes or with limited resources where annual versions struggle.

Perennial grain cropping systems could address a number of contemporary agroecological problems, including soil degradation, NO 3 leaching, and soil C loss. Since it is likely that these systems will be rotated with other agronomic crops, a better understanding of how rapidly perennial grain systems improve local ecosystem services is needed. We quantified soil moisture, lysimeter NO 3 leaching, soil labile C accrual, and grain yields in the first 2 yr of a perennial grain crop under development [kernza wheatgrass, Thinopyrum intermedium (Host) Barkworth & D.R. Dewey] relative to annual winter wheat (Triticum aestivum L.) under three management systems. Overall, differences between annual and perennial plants were much greater than differences observed due to management. In the second year, perennial kernza reduced soil moisture at lower depths and reduced total NO 3 leaching (by 86% or more) relative to annual wheat, indicating that perennial roots actively used more available soil water and captured more applied fertilizer than annual roots. Carbon mineralization rates beneath kernza during the second year were increased 13% compared with annual wheat. First-year kernza grain yields were 4.5% of annual wheat, but second year yields increased to 33% of wheat with a harvest index of 0.10. Although current yields are modest, the realized ecosystem services associated with this developing crop are promising and are a compelling reason to continue breeding efforts for higher yields and for use as a multipurpose crop (e.g., grain, forage, and biofuel).

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Intermediate wheatgrass (IWG) is a perennial species and has edible and nutritious grain and desirable agronomic traits, including large seed size, high grain yield, and biomass. It also has the potential to provide ecosystem services and an economic return to farmers. However, because of its allohexaploidy and self-incompatibility, developing molecular markers for genetic analysis and molecular breeding has been challenging. In the present study, using genotyping-by-sequencing (GBS) technology, 3436 genomewide markers discovered in a biparental population with 178 genets, were mapped to 21 linkage groups (LG) corresponding to 21 chromosomes of IWG. Genomic prediction models were developed using 3883 markers discovered in a breeding population containing 1126 representative genets from 58 half-sib families. High predictive ability was observed for seven agronomic traits using cross-validation, ranging from 0.46 for biomass to 0.67 for seed weight. Optimization results indicated that 8 to 10 genets from each half-sib family can form a good training population to predict the breeding value of their siblings, and 1600 genomewide markers are adequate to capture the genetic variation in the current breeding population for genomic selection. Thus, with the advances in sequencing-based marker technologies, it was practical to perform molecular genetic analysis and molecular breeding on a new and challenging species like IWG, and genomic selection could increase the efficiency of recurrent selection and accelerate the domestication and improvement of IWG.

Ecological intensification of agriculture is a proposed strategy to enhance the production of food while expanding ecosystem services and reducing inputs. Perennial plants that are directly harvested for human food are a novel means of ecological intensification, by potentially providing unprecedented levels of ecological services, such as increased soil carbon and reduced nutrient leaching. However, existing herbaceous perennial plants produce low yields of harvestable seed. Therefore, we initiated a domestication program to improve the grain yield of the perennial intermediate wheatgrass (Thinopyrum intermedium [Host] Barkworth & D.R. Dewey). The breeding program has adapted to changing resources and to results from previous generations, with methods becoming more elaborate as the program has matured over six breeding cycles. Average predicted gains from selection accumulated over five cycles were 143, 181 and 60% respectively, for seed yield per head, percent naked seed and mass per seed. We did not detect negative correlations that would indicate simultaneously achieving increased grain yield and sustained perenniality would be particularly difficult. Heritability estimates based on genetic markers were the same or higher than those calculated from a pedigree, indicating that markers have potential to expedite breeding efforts.