Background: Establishing reliable predictive and diganostic biomarkers of autism would enhance early identification and facilitate targeted intervention during periods of greatest plasticity in early brain development. High impact research on biomarkers is currently limited by relatively small sample sizes and the complexity of the autism phenotype. Methods: EEG-IP is an International Infant EEG Data Integration Platform developed to advance biomarker discovery by enhancing the large scale integration of multi-site data. Currently, this is the largest multi-site standardized dataset of infant EEG data. Results: First, multi-site data from longitudinal cohort studies of infants at risk for autism was pooled in a common repository with 1382 EEG longitudinal recordings, linked behavioral data, from 432 infants between 3-to 36-months of age. Second, to address challenges of limited comparability across independent recordings, EEG-IP applied the Brain Imaging Data Structure (BIDS)-EEG standard, resulting in a harmonized, extendable, and integrated data state. Finally, the pooled and harmonized raw data was preprocessed using a common signal processing pipeline that maximizes signal isolation and minimizes data reduction. With EEG-IP, we produced a fully standardized data set, of the pooled, harmonized, and pre-processed EEG data from multiple sites. Conclusions: Implementing these integrated solutions for the first time with infant data has demonstrated success and challenges in generating a standardized multi-site data state. The challenges relate to annotation of signal sources, time, and ICA analysis during pre-processing. A number of future opportunities also emerge, including validation of analytic pipelines that can replicate existing findings and/or test novel hypotheses.

This paper addresses the problem of automatic cry signal segmentation for the purposes of infant cry analysis. The main goal is to automatically detect expiratory and inspiratory phases from recorded cry signals. The approach used in this paper is made up of three stages: signal decomposition, features extraction, and classification. In the first stage, short-time Fourier transform, empirical mode decomposition (EMD), and wavelet packet transform have been considered. In the second stage, various set of features have been extracted, and in the third stage, two supervised learning methods, Gaussian mixture models and hidden Markov models, with four and five states, have been discussed as well. The main goal of this work is to investigate the EMD performance and to compare it with the other standard decomposition techniques. A combination of two and three intrinsic mode functions (IMFs) that resulted from EMD has been used to represent cry signal. The performance of nine different segmentation systems has been evaluated. The experiments for each system have been repeated several times with different training and testing datasets, randomly chosen using a 10-fold cross-validation procedure. The lowest global classification error rates of around 8.9% and 11.06% have been achieved using a Gaussian mixture models classifier and a hidden Markov models classifier, respectively. Among all IMF combinations, the winner combination is IMF3+IMF4+IMF5.

An analysis of newborn cry signals, either for the early diagnosis of neonatal health problems or to determine the category of a cry (e.g., pain, discomfort, birth cry, and fear), requires a primary and preliminary preprocessing step to quantify the important expiratory and inspiratory parts of the audio recordings of newborn cries. Data typically contain clean cries interspersed with sections of other sounds (generally, the sounds of speech, noise, or medical equipment) or silence. The purpose of signal segmentation is to differentiate the important acoustic parts of the cry recordings from the unimportant acoustic activities that compose the audio signals. This paper reports on our research to establish an automatic segmentation system for newborn cry recordings based on Hidden Markov Models using the HTK (Hidden Markov Model Toolkit). The system presented in this report is able to detect the two basic constituents of a cry, which are the audible expiratory and inspiratory parts, using a two-stage recognition architecture. The system is trained and tested on a real database collected from normal and pathological newborns. The experimental results indicate that the system yields accuracies of up to 83.79%. extracted from the cries and the health problems of the child [2][3][4][5]. Various studies are currently under way to devise a tool that analyzes cries automatically, to diagnose neonatal pathologies [6][7][8].We are involved in the design of an automatic system for early diagnosis, called the Newborn Cry-based Diagnostic System (NCDS), which can detect certain pathologies in newborns at an early stage. The implementation of this system requires a database containing hundreds of cry signals. The overwhelming problem that arises when working with such a database is the diversity of acoustic activities that compose the audio recordings, such as background noise, speech, the sound of medical equipment and silence. Such diversity could harm the analysis process, as the presence of any acoustic component other than the cry itself could result in the misclassification of pathologies by reducing the NCDS system performance. This is because the NCDS would decode every segment of the recording signal, whether it is part of a cry or not. In this case, unwanted segment insertion in essential crying segments would lengthen the process of classification unnecessarily and leave the system prone to error. An important subtask of the NCDS is the manipulation of the newborn cry sound, and what is needed to perform this subtask is a segmentation system. Until now, few works have been carried out in this area. In this paper, we propose an automatic segmentation module designed to isolate the audible expiration and inspiration parts of cry sounds to serve as a preprocessing step of our NCDS. The rest of this paper is organized as follows: Related work is presented in section 2. The HMM and the HTK are reviewed briefly in section 3. The training corpus and the testing corpus are described in section 4. In section 5, the architect...

Monitoring patients at risk of epileptic seizure is critical for optimal treatment and ensuing the reduction of seizure risk and complications. In general, seizure detection is done manually in hospitals and involves time-consuming visual inspection and interpretation by experts of electroencephalography (EEG) recordings. The purpose of this study is to investigate the pertinence of band-limited spectral power and signal complexity in order to discriminate between seizure and seizure-free EEG brain activity. The signal complexity and spectral power are evaluated in five frequency intervals, namely, the delta, theta, alpha, beta, and gamma bands, to be used as EEG signal feature representation. Classification of seizure and seizure-free data was performed by prevalent potent classifiers. Substantial comparative performance evaluation experiments were performed on a large EEG data record of 341 patients in the Temple University Hospital EEG seizure database. Based on statistically validated criteria, results show the efficiency of band-limited spectral power and signal complexity when using random forest and gradient-boosting decision tree classifiers (95% of the area under the curve (AUC) and 91% for both F-measure and accuracy). These results support the use of these automatic classification schemes to assist the practicing neurologist interpret EEG records more accurately and without tedious visual inspection.

The detection of cry sounds is generally an important pre-processing step for various applications involving cry analysis such as diagnostic systems, electronic monitoring systems, emotion detection, and robotics for baby caregivers. Given its complexity, an automatic cry segmentation system is a rather challenging topic. In this paper, a framework for automatic cry sound segmentation for application in a cry-based diagnostic system has been proposed. The contribution of various additional time- and frequency-domain features to increase the robustness of a Gaussian mixture model/hidden Markov model (GMM/HMM)-based cry segmentation system in noisy environments is studied. A fully automated segmentation algorithm to extract cry sound components, namely, audible expiration and inspiration, is introduced and is grounded on two approaches: statistical analysis based on GMMs or HMMs classifiers and a post-processing method based on intensity, zero crossing rate, and fundamental frequency feature extraction. The main focus of this paper is to extend the systems developed in previous works to include a post-processing stage with a set of corrective and enhancing tools to improve the classification performance. This full approach allows to precisely determine the start and end points of the expiratory and inspiratory components of a cry signal, EXP and INSV, respectively, in any given sound signal. Experimental results have indicated the effectiveness of the proposed solution. EXP and INSV detection rates of approximately 94.29% and 92.16%, respectively, were achieved by applying a tenfold cross-validation technique to avoid over-fitting.