During primary colonization of rock substrates by plants, mineral weathering is strongly accelerated under plant roots, but little is known on how it affects soil ecosystem development before plant establishment. Here we show that rock mineral weathering mediated by chemolithoautotrophic bacteria is associated to plant community formation in sites recently released by permanent glacier ice cover in the Midtre Lovénbreen glacier moraine (78 degrees 53'N), Svalbard. Increased soil fertility fosters growth of prokaryotes and plants at the boundary between sites of intense bacterial mediated chemolithotrophic iron-sulfur oxidation and pH decrease, and the common moraine substrate where carbon and nitrogen are fixed by cyanobacteria. Microbial iron oxidizing activity determines acidity and corresponding fertility gradients, where water retention, cation exchange capacity and nutrient availability are increased. This fertilization is enabled by abundant mineral nutrients and reduced forms of iron and sulfur in pyrite minerals within a conglomerate type of moraine rock. Such an interaction between microorganisms and moraine minerals determines a peculiar, not yet described model for soil genesis and plant ecosystem formation with potential past and present analogues in other harsh environments with similar geochemical settings.

Many soils in South Africa have low nutrient supply, poor structural stability and are prone to soil erosion due to susceptibility to surface sealing and crusting. Two crusting soils from the Eastern Cape Province, South Africa were used to evaluate the effects of inoculation with a strain of Nostoc on soil structure, fertility and maize growth. The Nostoc suspension was uniformly applied over potted soils at a rate of 6g (dry weight) per square meter soon after maize germination.Nostoc inoculation increased soil N by 17% and 40% in Hertzog and Guquka soils, respectively. Soil C was also increased significantly and this increase was strongly associated with that of soil N (R 2 = 0.838). The highest contents of soil C, soil N and mineral N, however, were found in non-cropped Nostoc inoculated soils. Nostoc inoculation increased maize dry matter yields by 49% and 40% in Hertzog and Guquka soils, respectively. Corresponding increases in maize tissue N were 23% and 14%, respectively. Scanning electron microscopy (SEM) revealed that soil particles and fragments of non-cropped inoculated soils had coatings of extracellular polymeric substances (EPS) with other particles enmeshed in networks of filaments, whilst by contrast little or no EPS and/or filaments were observed on cropped and/or non-inoculated soils. This was consistent with chemical analysis which showed that Nostoc caused significant increases in the EPS and soil C contents of non-cropped soils. The proportion of very stable aggregates was increased by inoculation with Nostoc possibly due to the greater quantities of soil C and EPS observed in inoculated soils. Inoculated soils cropped with maize had a lower proportion of stable aggregates presumably due to their low soil C and EPS contents compared to non-cropped soils. The results suggested that Nostoc could improve the fertility and structural stability of the studied degraded soils.

Among the stone monumental assets, artistic fountains are particularly affected by microbial colonization due to constant contact with water, giving rise to biodegradation processes related with physical-chemical and aesthetical alterations. In this paper, we make an overview of reported biodiversity of the phototrophic patina developed in various fountains of Italy and Spain. The microbial composition of four fountains (two from Florence, Italy and two from Granada, Spain) was investigated using traditional and/or molecular techniques. The results indicated many common similarities with regard the phototrophic biodiversity for all the investigated fountains. Automated ribosomal RNA intergenic spacer analysis (ARISA), a molecular fingerprint tool, was used to examine the eubacterial and cyanobacterial community for two of the investigated fountains. The principal component analysis of ARISA profiles strengthens the results obtained by traditional methods and revealed separate clusters, as a consequence of the differences of micro-environmental conditions for each fountain.

Cyanobacteria are widespread photosynthetic microorganisms among which some are able to fix atmospheric nitrogen. We investigated the impact of indigenous cyanobacteria strains (Nostoc) inoculation on physical characteristics of poorly aggregated soils from Guquka (Eastern Cape, South Africa). The soil aggregates (3-5 mm) were arranged into a layer of 10-20 mm thick, and sprayed with cyanobacteria solution. Subsequently the inoculated and un-inoculated samples were incubated (30°C, 80% humidity, continuous illumination at 100 lmol m -2 s -1 ). Their micromorphological characteristics and aggregate stability were investigated, after 1, 2, 3, 4 and 6 weeks of incubation, by using high resolution Cryo-SEM and aggregate breakdown tests.Micromorphological investigations revealed that the surface of uninoculated samples remained uncovered, while the inoculated samples were partially covered by cyanobacteria material after one week of incubation. A dense superficial network of cyanobacterial filaments and extracellular polymer secretions (EPS) covered their surface after 4 and 6 weeks of incubation. Organo-mineral aggregates comprising cyanobacterial filaments and EPS were observed after 6 weeks of incubation. The results of aggregate breakdown tests showed no significant difference between un-inoculated samples after 1, 2, 3, 4 or 6 weeks, while they revealed improvement of aggregate stability for inoculated samples. The improvement of aggregate stability appeared in a short while following inoculation and increased gradually with time and cyanobacteria growth. The increase in aggregate stability is likely related to the changes induced in micromorphological characteristics by cyanobacterial filaments and EPS. It reflects the effect of coating, enmeshment, binding and gluing of aggregates and isolated mineral particles by cyanobacteria material.

This study investigated the suitability of mid-infrared diffuse reflectance Fourier transform (MIR-DRIFT) spectroscopy, with partial least squares (PLS) regression, for the determination of variations in soil properties typical of Italian Mediterranean off-shore environments. Pianosa, Elba and Sardinia are typical of islands from this environment, but developed on different geological substrates. Principal components analysis (PCA) showed that spectra could be grouped according to the soil composition of the islands. PLS full cross-validation of soil property predictions was assessed by the coefficient of determination (R 2 ), the root mean square error of cross-validation and prediction (RMSECV and RMSEP), the standard error (SECV for cross-validation and SEP for prediction), and the residual predictive deviation (RPD). Although full cross-validation appeared to be the most accurate (R 2 = 0.95 for organic carbon (OC), 0.96 for inorganic carbon (IC), 0.87 for CEC, 0.72 for pH and 0.74 for clay; RPD = 4.4, 6.0, 2.7, 1.9 and 2.0, respectively), the prediction errors were considered to be optimistic and so alternative calibrations considered to be more similar to 'true' predictions were tested. Predictions using individual calibrations from each island were the least efficient, while predictions using calibration selection based on a Euclidian distance ranking method, using as few as 10 samples selected from each island, were almost as accurate as full cross-validation for OC and IC (R 2 = 0.93 for OC and 0.96 for IC; RPD = 3.9 and 4.7, respectively). Prediction accuracy for CEC, pH and clay was less accurate than expected, especially for clay (R 2 = 0.73 for CEC, 0.50 for pH and 0.41 for clay; RPD = 1.8, 1.5 and 1.4, respectively). This study confirmed that the DRIFT PLS method was suitable for characterizing important properties for soils typical of islands in a Mediterranean environment and capable of discriminating between the variations in soil properties from different parent materials.