Emphasis was placed in this work on the measurement of purine
oxidation products generated upon nano-
and picosecond UV laser biphotonic photolysis of 2‘-deoxyadenosine,
2‘-deoxyguanosine, calf thymus DNA, and a
synthetic duplex oligonucleotide (37-mer) in aerated aqueous solutions.
The overall formation of 8-oxo-7,8-dihydro-2‘-deoxyguanosine and 8-oxo-7,8-dihydro-2‘-deoxyadenosine was determined
using a HPLC-electrochemical detection
assay. Denaturing gel electrophoresis analysis in association with
a formamidopyrimidine−DNA glycosylase treatment
was applied to reveal the sites recognized by this DNA repair enzyme.
Both 8-oxo-7,8-dihydro-2‘-deoxyguanosine
and 8-oxo-7,8-dihydro-2‘-deoxyadenosine were shown to be minor
decomposition products of the related nucleoside
purine radical cations in agreement with earlier observations.
Interestingly, a dramatic increase in the yield of
both
photoproducts, this applying particularly to
8-oxo-7,8-dihydro-2‘-deoxyguanosine, was observed in DNA. It
should
be noted that the yield of 8-oxo-7,8-dihydro-2‘-deoxyguanosine was
about 3-fold lower in heat-denatured DNA than
in double-stranded DNA. These observations provide strong support
to the significant involvement of base stacking
and probably DNA solvatation in the chemical reactions of the purine
radical cations. Other interesting information
dealt with the similarity in the level of
8-oxo-7,8-dihydro-2‘-deoxyguanosine and the number of
formamidopyrimidine−DNA glycosylase sensitive guanine lesions. This strongly suggests
that the latter formamidopyrimidine−DNA
glycosylase purine nucleoside is the major DNA photodamaged product
recognized by the DNA repair glycosylase.
Another striking feature is the almost 10-fold decrease in the
saturation dose E
s for the two-quantum
ionization of
the guanine base in double-stranded DNA as compared to that observed
for free 2‘-deoxyguanosine. This can be
explained by either an enhancement of the quantum yield of
photoionization from the intermediate excited state in
DNA (φ2) and/or hole migration with preferential trapping
by guanine residues.
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