The x-ray-absorption near-edge structure (XANES) at the FeK edge of K3Fe(CN)6 and K4Fe(CN)6 has been measured and'interpreted by means of multiple-scattering calculations.The theory is able to account for the XANES over a 40-eV energy range. We demonstrate that the quasidiatomic "shape resonances" arising from multiple scattering within the CN groups play an important role in the XANES and suggest that this may be a common feature of XANES of metal atoms bound to molecular groups (e.g. , CO, CN, . . .) containing multiple bonds. The effects on the XANES of bond-length changes and distortions of the coordination geometry of the Fe(CN)6 cluster have been estimated. The different XANES spectra of [Fe(CN)6]2+ and of [Fe(CN)6]'+ have been interpreted in terms of charge-induced structural modifications. Comparison of XANES with extended x-rayabsorption fine-structure (EXAFS) and diffraction data shows that XANES can be used as a quantitative probe of local structure distortions which are not detected by EXAFS.
No abstract
The XANES (X-ray absorption near edge structure) spectra of deoxy human adult haemoglobin (HbA) and myoglobin (Mb) have been measured at the wiggler beam line of the Frascati synchrotron radiation facility. The XANES are interpreted by the multiple scattering cluster theory. The variations in the XANES between HbA and Mb are assigned to changes in the Fe-porphyrin geometry.Myoglobin Hemoglobin XANES X-ray absorption Synchrotron radiation Heme structure
The Fe-site structure variation in the transition from the low-affinity tense (T) quaternary structure to the high-affinity relaxed (R) structure in carp deoxyhemoglobin was studied by analysis of multiple scattering resonances in the XANES (x-ray absorption near edge structure) spectra. High signal-to-noise XANES spectra were measured at the Frascati "wiggler" synchrotron radiation facility. We find that the forces on the Fe active site due to the change of quaternary protein conformation do not induce (i) variations >0.01 A in interatomic Fe-N distances, (ii) variations >0.1 A in the Fe displacement toward the heme plane, or (iii) the "doming" of the heme. The relevance of these results to the mechanism of protein control of ligand binding is discussed.Below pH 5.6 in the presence of allosteric effectors like inositol hexakisphosphate (Ins-P6), carp hemoglobin has a very low oxygen affinity and ligand binding is not cooperative (1)(2)(3)(4). This lack of cooperativity has been attributed (5) to the inhibition at acid pH of the allosteric transition from the tense (T) conformation of carp deoxyhemoglobin to the relaxed (R) conformation with ligand binding. On the other hand, the transition, with release of the ligand, from the R conformation of the ligated carp hemoglobin (HbCO and HbN3) to the T conformation of deoxyhemoglobin is precluded at alkaline pH. Therefore, carp deoxyhemoglobin presents the anomalous R conformation with high ligand affinity at alkaline pH that we will call here Rd. (Similarly, Td is the T quarternary state of carp deoxyhemoglobin at low pH.)Because allosteric effectors can induce the Td (low affinity) to Rd (high affinity) transition in carp deoxyhemoglobin, this protein has attracted much interest with the aim of investigating the correlation between the protein quaternary conformation and the local structure in the active site-i.e., the Fe position in the heme, which is a key point in the explanation of oxygen-binding cooperativity in hemoproteins (6,7). The interest is now addressed to the correlation between the variation of the quaternary structure (defined as the structure of the al/P82 interface) and the conformation of the immediate environment about the Fe site (which defines the protein tertiary structure) and the Fe coordination site structure.Diffraction studies to establish at the same time the protein conformation and local structure of the active site can be performed only on protein crystals. Spectroscopic methods that can be used to study the protein in solution, such as optical spectroscopy, resonance Raman spectroscopy, and magnetic susceptibility, are not direct probes of atomic positions.The structure of carp deoxyhemoglobin, as well as its variation from the low-to high-affinity form, has not been determined by crystallography. Therefore, there is a lack of direct experimental information on the variation of structure of this protein. Small changes have been observed in resonance Raman spectra between low-affinity deoxyhemoglobin and anomalous or patholog...
The effect of allosteric effectors, such as inositol hexakisphosphate and/or bezafibrate, has been investigated on the unliganded human adult hemoglobin both spectroscopically (employing electronic absorption, circular dichroism, resonance Raman, and x-ray absorption near-edge spectroscopies) and functionally (following the kinetics of the first CO binding step up to a final 4% ligand saturation degree). All data indicate that the unliganded T-state is not perturbed by the interaction with either one or both effectors, suggesting that their functional influence is only exerted when a ligand molecule is bound to the heme. This is confirmed by the observation that CO dissociation from partially liganded hemoglobin ( = 0.04) is strongly altered by the presence of either effector, and the effect is enhanced whenever the two effectors are simultaneously present. Altogether, these data are a direct demonstration of the occurrence of a strain induced by the presence of a ligand molecule bound to the heme, and for the first time there is a clear indication that the expression of the functional heterotropic effect by these non-heme ligands requires this strain, which is not present in the unliganded molecule.
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