The radical S-adenosyl methionine (SAM)
enzyme
superfamily has widespread roles in hydrogen atom abstraction reactions
of crucial biological importance. In these enzymes, reductive cleavage
of SAM bound to a [4Fe-4S]1+ cluster generates the 5′-deoxyadenosyl
radical (5′-dAdo•) which ultimately abstracts an H atom
from the substrate. However, overwhelming experimental evidence has
surprisingly revealed an obligatory organometallic intermediate Ω
exhibiting an Fe-C5′-adenosyl bond, whose properties are the
target of this theoretical investigation. We report a readily applied,
two-configuration version of broken symmetry DFT, denoted 2C-DFT,
designed to allow the accurate description of the hyperfine coupling
constants and g-tensors of an alkyl group bound to a multimetallic
iron–sulfur cluster. This approach has been validated by the
excellent agreement of its results both with those of multiconfigurational
complete active space self-consistent field computations for a series
of model complexes and with the results from electron nuclear double-resonance/electron
paramagnetic resonance spectroscopic studies for the crystallographically
characterized complex, M–CH3, a [4Fe-4S] cluster
with a Fe–CH3 bond. The likewise excellent agreement
between spectroscopic results and 2C-DFT computations for Ω
confirm its identity as an organometallic complex with a bond between
an Fe of the [4Fe-4S] cluster and C5′ of the deoxyadenosyl
moiety, as first proposed.
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