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Purpose The aim of this work is to investigate the self-healing performance of epoxy coatings containing microcapsules. The microcapsule-based coatings were applied on AA6061 Al alloy and immersed in 3.5 per cent NaCl solution. Design/methodology/approach Microcapsules with urea–formaldehyde as the shell and linseed oil as the healing agent were prepared by in situ polymerization in an oil-in-water emulsion. For the sake of an optimum self-healing system, some coating samples were prepared by using different microcapsule concentrations: 0, 5, 10 and 20 Wt.%. The scratch-filling efficiency as the theoretical estimate of the self-healing performance was calculated for the coating samples with different microcapsule concentrations. The scratch-sealing efficiency (SSE) as a particularly crucial parameter in the self-healing evaluation of coatings was measured by both electrochemical impedance spectroscopy (EIS) and electrochemical noise (EN) techniques. Findings According to EIS and EN results, the coating samples containing 5 and 10 per cent microcapsules provided the insignificant self-healing performance, while the coating sample containing 20 per cent microcapsules exhibited the acceptable self-healing performance to AA6061 alloy in the NaCl solution. The measured SSE values confirmed the good agreement of EN data with electrochemical parameters obtained from the EIS technique. Originality/value This work is an attempt to evaluate the self-healing performance of microcapsule-based epoxy coatings applied on AA6061 Al alloy in sea water.