The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25–50%) than euchromatic reference regions (3–11%). Among the F elements, D. grimshawi has the lowest transposon density (particularly DINE-1: 2% vs. 11–27%). F element genes have larger coding spans, more coding exons, larger introns, and lower codon bias. Comparison of the Effective Number of Codons with the Codon Adaptation Index shows that, in contrast to the other species, codon bias in D. grimshawi F element genes can be attributed primarily to selection instead of mutational biases, suggesting that density and types of transposons affect the degree of local heterochromatin formation. F element genes have lower estimated DNA melting temperatures than D element genes, potentially facilitating transcription through heterochromatin. Most F element genes (~90%) have remained on that element, but the F element has smaller syntenic blocks than genome averages (3.4–3.6 vs. 8.4–8.8 genes per block), indicating greater rates of inversion despite lower rates of recombination. Overall, the F element has maintained characteristics that are distinct from other autosomes in the Drosophila lineage, illuminating the constraints imposed by a heterochromatic milieu.

Proliferating eukaryotic cells tightly regulate DNA replication so that it occurs only once per cell cycle and on experiencing DNA damage, this process is rapidly inhibited by the regulation of key proteins to avoid aberrant replication. DNA replication begins by binding of a six-subunit origin recognition complex to the origin of replication followed by recruitment of several additional initiation factors, including CDC6, Cdt1, and MCM, in the M and G 1 phase of the cell cycle. An increase in cyclin-dependent kinase activity at the G 1 -S transition promotes the unwinding of DNA and the recruitment of the DNA synthesis factors, CDC45, GINS complex, RPA, and the DNA polymerase ␣-primase. Mcm10 is a conserved DNA replication protein with homologs from

When mammalian cells experience radiation insult, DNA replication is stalled to prevent erroneous DNA synthesis. UV-irradiation triggers proteolysis of Mcm10, an essential human replication factor, inhibiting the ongoing replication. Here, we report that Mcm10 associates with E3 ubiquitin ligase comprising DNA damage-binding protein, DDB1, cullin, Cul4 and ring finger protein, Roc1. Depletion of DDB1, Roc1 or Cul4 abrogates the UV-triggered Mcm10 proteolysis, implying that Cul4–Roc1–DDB1 ubiquitin ligase mediates Mcm10 downregulation. The purified Cul4–Roc1–DDB1 complex ubiquitinates Mcm10 in vitro, proving that Mcm10 is its substrate. By screening the known DDB1 interacting proteins, we discovered that VprBP is the substrate recognition subunit that targets Mcm10 for degradation. Hence, these results establish that Cul4–DDB1–VprBP ubiquitin ligase mediates the stress-induced proteolysis of replication factor, Mcm10.

Wetlands, the biological filters of the Earth, play an important role in biochemical transformation of various pollutants. Wetland plants, in this direction, help in accumulating various contaminants from aquatic bodies. Considering this, the present study was planned to estimate different metals (Cd, Cu, Cr, Co, Fe, Pb, Zn, and Mn) in water, sediment, soil, and plant (4 aquatic and 12 terrestrial) samples of Kanjli wetland, Kapurthala, Punjab (India), and a Ramsar site. It was observed that the contents of Cd and Pb in water samples were higher than limits prescribed by Bureau of Indian standards. Bioaccumulation and translocation factors for various metals were also calculated. Although all the plant species were found to be hyperaccumulator for one or the other metal studied, maximum six metals (Cd, Co, Fe, Mn, Pb, and Zn) were bioaccumulated in Panicum antidotale among aquatic plant species while (Cd, Cu, Fe, Mn, Pb, and Zn) in Lantana camara and Ageratum conyzoids among terrestrial plants species. It is evident that all these plants have potential to phytoremediate various inorganic pollutants and can act as bioindicators. The physicochemical characteristics revealed high biochemical oxygen demand (BOD) and nitrate (NO3) contents and low dissolved oxygen (DO) in water samples while the high content of phosphates in soil and sediment samples.

Galectins are β-galactoside binding lectins that contain one or more carbohydrate recognition domains. As a consequence of sugar-binding properties, galectins exhibit a variety of interactions with glycoproteins, thus playing important roles in various pathological processes. A number of studies have shown roles of galectins in cancer. Galectin-7 is a prototype member of the galectin family implicated in epithelial stratification and cell migration. It can act as a potent dual regulator in different types of cancer. Galectin-7 may contribute either to neoplastic transformation and tumour progression through regulation of cell growth, cell cycle, angiogenesis, apoptosis and cell migration or may have a protective effect in cancer depending on the tissue type. A perusal of the literature indicates particular roles of galectin-7 in carcinomas and melanomas, while contributions await greater exploration in other types of cancers including sarcomas and leukemia. This review collectively summarizes available literature on expression and roles of galectin-7 in different cancers.