The characterization of modern pollen rain assemblages along environmental gradients is an essential prerequisite for reliable interpretations of fossil pollen records. In this study, we identify pollen-vegetation relationships using modern pollen rain assemblages in moss polsters (n = 13) and lake sediment surface samples (n = 11) along a steep temperature gradient of 7°C (3100–4200 m above sea level) on the western Andean Cordillera, Ecuador. The pollen rain is correlated to vascular plant abundance data recorded in vegetation relevées (n = 13). Results show that pollen spectra from both moss polsters and sediment surface samples reflect changes in species composition along the temperature gradient, despite overrepresentation of upper montane forest taxa in the latter. Estimated pollen transport distance for a lake (Laguna Llaviucu) situated in a steep upper montane forest valley is 1–2 km, while a lake (Laguna Pallcacocha) in the páramo captures pollen input from a distance of up to 10–40 km. Weinmannia spp., Podocarpus spp., and Hedyosmum sp. are indicators of local upper montane forest vegetation, while Phlegmariurus spp. and Plantago spp. are indicators for local páramo vegetation.

A robust understanding of the impact of anthropogenic activities on high-altitude tropical aquatic ecosystems is key for the conservation and protection of the Tropical Andean biodiversity hot spot. We present the results of a multiproxy study of lake sediments from the high Andean páramo of El Cajas National Park, a UNESCO biosphere reserve in Ecuador. The main site, Laguna Pallcacocha, is well known for recording El Niño–driven clastic flood layers that are triggered by high-intensity rainfall anomalies from the eastern Pacific. The second site, Laguna El Ocho, does not contain clastic laminations, providing a control. The records show abrupt shifts in diatom assemblages ca. AD 1991 in both high-elevation Andean lakes accompanied by local changes in páramo composition that suggest a sudden nutrient enrichment of the environment. The diatom assemblages from Laguna Pallcacocha, in relation to the clastic input events, are remarkably stable and do not show evident El Niño signals at the analysed resolution. Based on comparison with the nonlaminated El Ocho record, we deduce the main source of this nutrient enrichment to be the construction of a heavily transited road that runs through the park, while climate warming played secondary role by amplifying its effects.