Sea trout (Salmo trutta L.) stocks on the West Coast of Scotland and Ireland have decreased due to reduced survival during the marine phase of their life cycle. Lice‐infested sea trout returning to rivers could indicate that parasite burdens are contributing to the decline. Salmon farms represent a potential source of substantial quantities of sea lice, leading to a conjectured link between parasites on salmon fish farms and infestations on wild sea trout. To investigate the potential infective pressure on sea trout in Loch Shieldaig, offshore and sub‐littoral plankton samples were collected and analysed for sea lice nauplius and copepodid stages. During the plankton survey, numbers of sea lice on a fish farm in the loch reached a maximum in November 2001. Soon after, numbers of sea lice larvae peaked in open‐water samples and then in sub‐littoral samples. Nauplii were found adjacent to the farm and occurred less elsewhere. This study reports a concentration of sea lice larvae at the head of Loch Shieldaig and indicates a possible relationship between sea lice numbers on the fish farm and lice larvae densities in the open‐water of the loch and in the sub‐littoral zone.

This study examines the relative density of sea lice, Lepeophtheirus salmonis (Krøyer), larvae in the inter‐tidal areas of Loch Torridon, a fjordic sea loch in Western Scotland and the site of several commercial salmon farms. Samples of planktonic sea lice were collected in each spring from 1999 to 2003 near the mouth of the River Shieldaig, where sea trout have been shown to congregate in the first few days after going to sea, and from 2001 to 2003 near the mouth of the River Balgy. No larval sea lice were found near the mouth of the River Shieldaig in spring 2000 or 2002, when gravid female sea lice were absent on local fish farms. The same finding was observed in 2002 at the mouth of the River Balgy. In springs of 1999, 2001 and 2003, peak densities of larval sea lice of 33, 94 and 143 m−3, respectively, were observed at the mouth of the river Shieldaig. At the mouth of the River Balgy, peak densities of 74 and 78 lice m−3 were observed in 2001 and 2003 respectively. At the time these samples were collected, the two local salmon farms were in the second year of their production cycle and gravid female sea lice were present. Samples of larval sea lice were also obtained year round, at approximately weekly intervals, from a 50‐m transect at the mouth of the River Shieldaig, from March 2001 to June 2003, and compared with frequencies of gravid female sea lice on the two local salmon farms. High levels were found in the winter. No planktonic sea lice were found in this transect when gravid females were not present on the local fish farms.